Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00913 ATGGTCTTGTGTAGGTGTCTCTCTTTTTTGACTGGAAAGAGAGAGAAAAACAAGGGTACTGAACAGTCTTCCACAGGGGACCTTAATACCCAACTTGGTGAAGTACTACACCCAAAGATTTCATCAGAGAGTCGTGATTTGAAGCCGGCCACCGTTGATGTTACAGTACCCAGTGGTGTGCAGAAGAATTCAAGGGGCAATGTGAGGGTTATGAGTCTCGAGAGTCCTGTGAAGACTGAAGTGGAGGAAGCTTATGAAGGGGAAGATGAGCATGAGGAGTCTCCTTCCATCAAGAGGGAGCTCTCTGATTTTGATCTCCAAGTCCACGAAGCTGCTGTGATCCAAGGAAGATATCATCCATCAAGTGAAGAGATAAAATGCCCCAGTTTATATGAACACCAAGCTAACATTCAATTAGAAGACAGAGACCATAAATACAGCAAAAAGAGTGATGATATAATCCAAAGTGGACATGTTAGTGATCCTGGGATTGGCAAGGCTGACTTTTGCGCTTCTCCTAAGCTCAAGCGTTCCTGCTCTGACCTGGAAAGAAGGGATGTACTAAGGAAGACTTCTCATCTCTTTCCGTCTTCAAAGTCACAGTCTTTTGAGAATTTGCAGGGGTTATCAGCATATCAGATGGTTAATCTAGAAAGCCCCAGGTCAGTGATGACTCACGGCAGTGCTGATAGAGTGATGTTGAAAAAGCATTCCTCAAGTCAAGTTCTCCCTTCTAGAAGTAAAAGATTGTGGTGGAAGTTGTTCCTCTGGAGCCACAGGAATATACATAGAATGCAGTTAGGCAAACTGAAAACAATACATCCTGCAAGTGCTGCTTTAAAGAGTCAATGTGGGTACTCTTCAGACACTCTTGAAGCAAAACATGGCAAGGCATTGAGACATGTGGAATTGCCCTCACCCAGCTCATCTTATGGGGAATACTTTCACAACAGCTGCGATGATGGAAATATTGATAAGCAAAGGTGGAGCAGATTTCAAAAAGAGAATTTTGGTTTTTGGCCACAAAACCAATGGGTGGCTTTCTCAACAGAATCATCCTCCTTTAGCAGAGTGGATGAGTGGGTGAAAGATCTCGAAATTCAGCAGCCACCTCCTGAGGATGATTTTGATGATGACAATATTGGAACCATTGCCTTCCCACCTTCTCCTGATGCTATCCCACAATTCATAGCATCCTCAAGCACAGCTCAGTCTGTTCGACATCCAGATGCCAATCTTTCAAAAGAGATATTGAATGCCAATAGTGTGGTTCAGTCCCTGAACCCAGCCTCAACTGCAGCTCATATATCAGGCATTGGTATAAAAGCCATCCCGTCTATTTCACACTTCTCCACTCTCCGCTCTGTCAATTTGTCAAGCAATCTCATAGTTCACATCACACCTGGATTTCTCCCAAAGGGTCTTCATACTCTGAATCTGTCAAGAAACAAAATCAGCACCATTGAGGGCCTCAGAGAATTAACCCGGCTGCGGGTACTTGACTTAAGTTATAATCGCATTTCAAGAATTGGACAAGGGTTATCAAATTGTACCCTCATCAAAGAGCTATATCTCGCGGGAAACAAGATAAGTGATGTTGAGGGGCTACACAGGTTATTAAAGCTAACAGTTCTGGACTTGAGCTTTAACAAGATTTCAACAACAAAAGCATTGGGCCAGCTGGTGGCTAACTACAACTCACTTCAGGCCCTGAATCTGCTTGGAAATCCAATTCAAAGCAACATCAGTGATGACCAGCTGCGCAAAGTAGTTTGTGGTCTTCTTCCAAAGCTTGTGTACCTGAACAAGCAATCTATCAAGCCTCAAAGGGGACGAGAAATACTCACTGATAGTGTTGCCAAAGCTGCACTTGGGAACAGCAGCCGGAACTCCTACAGAAGAGCACTAAAGAAAGGTGGTGGCCAAGGAGGGTCAAGTTCCTCCAGTGTGCATAGAAGCAGTGCTAGTGTTTCCCAGAAAAGCAGGAACAGGTCAAGGAGCCGAACTAAACATCATTAG 2019 0.4418 MVLCRCLSFLTGKREKNKGTEQSSTGDLNTQLGEVLHPKISSESRDLKPATVDVTVPSGVQKNSRGNVRVMSLESPVKTEVEEAYEGEDEHEESPSIKRELSDFDLQVHEAAVIQGRYHPSSEEIKCPSLYEHQANIQLEDRDHKYSKKSDDIIQSGHVSDPGIGKADFCASPKLKRSCSDLERRDVLRKTSHLFPSSKSQSFENLQGLSAYQMVNLESPRSVMTHGSADRVMLKKHSSSQVLPSRSKRLWWKLFLWSHRNIHRMQLGKLKTIHPASAALKSQCGYSSDTLEAKHGKALRHVELPSPSSSYGEYFHNSCDDGNIDKQRWSRFQKENFGFWPQNQWVAFSTESSSFSRVDEWVKDLEIQQPPPEDDFDDDNIGTIAFPPSPDAIPQFIASSSTAQSVRHPDANLSKEILNANSVVQSLNPASTAAHISGIGIKAIPSISHFSTLRSVNLSSNLIVHITPGFLPKGLHTLNLSRNKISTIEGLRELTRLRVLDLSYNRISRIGQGLSNCTLIKELYLAGNKISDVEGLHRLLKLTVLDLSFNKISTTKALGQLVANYNSLQALNLLGNPIQSNISDDQLRKVVCGLLPKLVYLNKQSIKPQRGREILTDSVAKAALGNSSRNSYRRALKKGGGQGGSSSSSVHRSSASVSQKSRNRSRSRTKHH 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00913 672 Gene3D Ribonuclease Inhibitor 390 516 IPR032675 -
Gma06g00913 672 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 4 671 - -
Gma06g00913 672 SMART LRR_typ_2 450 472 IPR003591 -
Gma06g00913 672 SMART LRR_typ_2 539 561 IPR003591 -
Gma06g00913 672 SMART LRR_typ_2 494 517 IPR003591 -
Gma06g00913 672 SMART LRR_sd22_2 539 560 - -
Gma06g00913 672 SMART LRR_sd22_2 517 538 - -
Gma06g00913 672 SMART LRR_sd22_2 472 493 - -
Gma06g00913 672 SMART LRR_sd22_2 494 516 - -
Gma06g00913 672 Pfam Leucine rich repeat 452 507 IPR001611 GO:0005515
Gma06g00913 672 ProSiteProfiles Leucine-rich repeat profile. 519 540 IPR001611 GO:0005515
Gma06g00913 672 SUPERFAMILY Outer arm dynein light chain 1 441 606 - -
Gma06g00913 672 Pfam Leucine Rich repeat 541 553 IPR001611 GO:0005515
Gma06g00913 672 ProSiteProfiles Leucine-rich repeat profile. 474 495 IPR001611 GO:0005515
Gma06g00913 672 MobiDBLite consensus disorder prediction 641 662 - -
Gma06g00913 672 Gene3D Ribonuclease Inhibitor 517 611 IPR032675 -
Gma06g00913 672 ProSiteProfiles Leucine-rich repeat profile. 541 562 IPR001611 GO:0005515
Gma06g00913 672 MobiDBLite consensus disorder prediction 628 672 - -
Gma06g00913 672 ProSiteProfiles Leucine-rich repeat profile. 496 518 IPR001611 GO:0005515
Gma06g00913 672 PANTHER NISCHARIN RELATED 4 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00913 Gma-Chr6 8430106 8434189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00913 445 571 Receptor kinase-like Gene Family AT4G08850 34.058 2.20e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00913 - - gmx:100810094 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00913 06 8430106 8434189 Gma06g00913 06 8430106 8434189 ECH
Gma04g00931 04 9429040 9431537 Gma06g00913 06 8430106 8434189 GST
Gma14g01739 14 47136898 47140232 Gma06g00913 06 8430106 8434189 PCT
Gma06g00913 06 8430106 8434189 Gma14g01739 14 47136898 47140232 PCT