Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00931 ATGGCCTTGTGTAGGTGTCTCTCTTTTTTTACTGGAAAGAAAGAGAAAAACAAGGGTACTGAGGGGTCTTCAACAGGGGAACTTAAAGCTCAACTTGATGAAGTACAGCACCCAAAGATTTTGTCAGAGAATTGTGATTTGAAGCCAGCCACCCTTGACGTTCCAGTACCCAGTGGTGTGCAGAAGAATTCAAGGGGCAATGTAAGGGTTATGAATCTTGAGAGTCCTGTGAAGACTGAAGTGGAGGAAGCTTATGAAGGGGAAGATGAGCATGAAGAATCACCTTCCATCAAGAGGGAGCTCTCTGATTTTGATCTCCAAGTCCTCGAAGTTGCTGCAAGCAAAGGAGGATATGATCCATCAAGTGAAGAGATAAAATACCCTAGTTTATACGAAAACCAAGCTAACATTCAATTGGAAGACAAAGACCATGAATACAGCAAAAAGAGTTGTGACATAATTCAAAGTGGACATGTCAGTGATCCTGGGATTGGCAAAGCTGAATTTTGTGCTTCTCCAAAGCTCAAGCGATCCTGCTCTGACCTGGAAAGAAGGGATGTACTAAGGGAGACTTGTCATCTCTTTCCATCTTCAAAGTCACAGTCTTTTGAGGATTTGCAGGGGTTATCAGCACATCAGATGGTTAATCTAGAAAGCCCCAGGTCTGTGATGACTCACCGCAGTGCTGATAGAGTGATGTTGAAAAGGCATTCCTCAAGTCAAGTTCTCCCTTCTAGAAGTAAAAGACTGTGGtggaagttgttcctctggagccacaggaatatacatagatctcagttaagcaaatcgacacaaataCATCCTGTGACTGCTGCTTTAAATAGTCAATGTGGGTACTCCTCAGACACCCTTGAACCAAAACAAGACAAGGCTTTGAGCCATGTGGAATCACACTCACCAAGCTCATCGTTTGGGGAATACTTTCAGAAAAGCTGCGATGACAGAAATTTTGATAACCAAAGGTGGAGCAGATTTCAGAAAGATAATTTTGGTTTCTGGCCACAAAATCAATGGGTGGCTTTCTCCACAGAATCATCCTCATATAGCAGAGTGGATGAGTGGGTGAAAGATCTCGAAATTCAGCAGCCACCTCTTGAGGATGATTTCAATGATGACAATATTGGAAGCATTGCCTTCCCACCTTCTCCTGATGATGGTAGATCAATGGCAAGAAGCACAGCCCAGTTGATTCAACATCCAGATGCCAATCTTTCAAAGGAGATATTGAATGCCAATAGTGTGGTCCAGTCCCTGAACCCAGCCTCAACTGCAGCTCATATATCAAGCATTGGCATAAAAGCCATCCCCTCTCTTTCACACTTTTTCAGTCTCCGCTGTGTCAATTTGTCGAACAATCTCATAGTTCATATCACGCCCGGATTTCTCCCAAAGGGTATTCATACACTGAATCTGTCAAGAAACAAAATCAGCACTATTGAAGGCCTTAGAGAATTAACACGGCTGCGGGTACTTGACTTAAGTTATAATCGCATCTCAAGAATTGGACAAGGATTATCAAATTGTACCCTAGTCAAAGAGCTATATCTTGCTGGAAACAAGATAAGTGATGTTGAGGGGCTACATAGGTTATTGAAGCTAACAGTTCTGGACCTGAGCTTTAACAAGATCGCAACAACAAAAGCATTAGGCCAGCTGGTGGCTAACTACAACTCACTTCAGGCCCTGAATCTGCTTGGAAATCCAATTCAAAGCAACATCAGTGATGATCAGCTGCGCAAAGCAGTTTGTGGTCTTCTTCCAAAGCTTGTTTACCTGAACAAGCAATCTATCAAGACTCAAAGGGGACGAGAAATACTCACTGATAGTGTTGCCAAAGCTGCACTTGGTAACAGCAGCCGGACCTCCTACAGAAGAGCACTAAAGAAAGGTGGCGGCCATGGAGGGTCAAGTTCCTCCAGTGTGCATAGAAGCAGTGCTAGTGTTTCCCAGAAAATCAGGAACAGGTCAAGGAGCCAAACTAAACATCATTAG 2013 0.4213 MALCRCLSFFTGKKEKNKGTEGSSTGELKAQLDEVQHPKILSENCDLKPATLDVPVPSGVQKNSRGNVRVMNLESPVKTEVEEAYEGEDEHEESPSIKRELSDFDLQVLEVAASKGGYDPSSEEIKYPSLYENQANIQLEDKDHEYSKKSCDIIQSGHVSDPGIGKAEFCASPKLKRSCSDLERRDVLRETCHLFPSSKSQSFEDLQGLSAHQMVNLESPRSVMTHRSADRVMLKRHSSSQVLPSRSKRLWWKLFLWSHRNIHRSQLSKSTQIHPVTAALNSQCGYSSDTLEPKQDKALSHVESHSPSSSFGEYFQKSCDDRNFDNQRWSRFQKDNFGFWPQNQWVAFSTESSSYSRVDEWVKDLEIQQPPLEDDFNDDNIGSIAFPPSPDDGRSMARSTAQLIQHPDANLSKEILNANSVVQSLNPASTAAHISSIGIKAIPSLSHFFSLRCVNLSNNLIVHITPGFLPKGIHTLNLSRNKISTIEGLRELTRLRVLDLSYNRISRIGQGLSNCTLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKIATTKALGQLVANYNSLQALNLLGNPIQSNISDDQLRKAVCGLLPKLVYLNKQSIKTQRGREILTDSVAKAALGNSSRTSYRRALKKGGGHGGSSSSSVHRSSASVSQKIRNRSRSQTKHH 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00931 670 ProSiteProfiles Leucine-rich repeat profile. 539 560 IPR001611 GO:0005515
Gma04g00931 670 SMART LRR_sd22_2 470 491 - -
Gma04g00931 670 SMART LRR_sd22_2 515 536 - -
Gma04g00931 670 SMART LRR_sd22_2 537 558 - -
Gma04g00931 670 SMART LRR_sd22_2 492 514 - -
Gma04g00931 670 Pfam Leucine rich repeat 450 505 IPR001611 GO:0005515
Gma04g00931 670 ProSiteProfiles Leucine-rich repeat profile. 517 538 IPR001611 GO:0005515
Gma04g00931 670 ProSiteProfiles Leucine-rich repeat profile. 472 493 IPR001611 GO:0005515
Gma04g00931 670 Gene3D Ribonuclease Inhibitor 401 509 IPR032675 -
Gma04g00931 670 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 4 669 - -
Gma04g00931 670 MobiDBLite consensus disorder prediction 640 661 - -
Gma04g00931 670 Gene3D Ribonuclease Inhibitor 510 609 IPR032675 -
Gma04g00931 670 SMART LRR_typ_2 448 470 IPR003591 -
Gma04g00931 670 SMART LRR_typ_2 537 559 IPR003591 -
Gma04g00931 670 SMART LRR_typ_2 492 515 IPR003591 -
Gma04g00931 670 ProSiteProfiles Leucine-rich repeat profile. 494 516 IPR001611 GO:0005515
Gma04g00931 670 PANTHER NISCHARIN RELATED 4 669 - -
Gma04g00931 670 MobiDBLite consensus disorder prediction 628 670 - -
Gma04g00931 670 SUPERFAMILY Outer arm dynein light chain 1 440 604 - -
Gma04g00931 670 Pfam Leucine Rich repeat 539 550 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00931 Gma-Chr4 9429040 9431537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00931 497 624 Receptor kinase-like Gene Family AT5G07280 35.878 3.05e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00931 - - gmx:100813969 1253.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00931 04 9429040 9431537 Gma04g00931 04 9429040 9431537 ECH
Gma04g00931 04 9429040 9431537 Gma06g00913 06 8430106 8434189 GST
Gma14g01739 14 47136898 47140232 Gma04g00931 04 9429040 9431537 PCT
Gma04g00931 04 9429040 9431537 Gma14g01739 14 47136898 47140232 PCT