Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00904 ATGGCTGCCACTGCTTCCAACTCTCTCCTTTGCACCAAAACGCTAGTCCCAACCCTCCCTTCTTCCTCCAACAACCTCAACAACAGCAACCAATGCTCCTCCTTTCCCAGGCCCAGGCCCAGGCCCATCCAGGCCCTGAACAACTCCGTGACTGTAATAACCGACAAGAAGTGCGAGGCAAAGTGGGTGGTGGACAGCTGGAAGTCCAAAAAGGCTCTTCAACTCCCGGAATACCCGGAGCAAGAGAAGCTCCAGTCGGTGCTCAAGAGCCTGGAAGCCTTCCCTCCGATTGTGTTTGCCGGAGAGGCCCGCAACCTCGAGGAGCGCCTCGCCCAGGCTTCCATGGGAAACGCGTTCCTCCTCCAGGGCGGAGACTGCGCTGAGAGCTTCAAGGAGTTTCATGCAAATAACATTCGTGACACCTTCAGACTCCTCCTCCAAATGAGTGTCGTCACCATGTTCGGAGCCCAAGTGCCTGTCATTAAGGTGGGAAGAATGGCGGGTCAATTTGCGAAACCGAGATCGGAAGCGTTTGAGGAGAAAGACGGGGTGAAACTCCCAAGTTACAGAGGAGATAATGTGAATGGAGATGCTTTCGAGGAGAAAACGAGAATTCCTGATCCTGAAAGAATGATAAGATCATACAGCCAATCTGCTGCGACTCTCAATCTTCTGAGAGCATTTGCGACGGGAGGATATGCTGCTATGCAAAGGGTTAGCCAATGGAATTTGGACTTCACGCAACACAGCGAGCAAGGAGACAGGTACCTAGAGCTTGCTCGCCGAATTGATGAGACCCTTGGGTTCATGGCTGCTGCTGGCCTCACAATGGATCATCCTATAATGAAAACAACCGAGTTTTGGACTTCACATGAATGTTTGTTATTGCCCTATGAACAATCACTCACTAGGTTGGATTCAACTTCTGGTCTCTACTATGACTGCTCCGCCCATATGCTTTGGGTTGGTGAACGGACTAGACAGCTCGATGGTGCTCATGTTGAATTTCTAAGAGGGATTGCTAATCCCCTTGGAATTAAGGTAAGTGATAAGATCGATCCAAAGGAGCTTATTAGACTAATAGAGATCTTGAATCCCCAGAACAAGCCAGGGAGAATAACTGTGATAACGAGGATGGGAGCTGAAAATACGAGGGCGAAACTTCCACATCTGATCAGGGGAGTACGCAATGCGGGACTAATTGTATGTTGGGTCAGTGATCCTATGCATGGAAACACCATAAAAGCTCCCTGTGGACTCAAAACTCGCCCCTTCCATTCCATCATGGAGGAGGTGAAATCATTCTTCGACGTGCATGAACAAGAAGGAAGCCACCCAGGTGGGGTTCATCTAGAGATGACAGGTCAGAATGTGACTGAGTGCATTGGTGGGTCAAAGATGGTCACCTTTGATGATCTCAGCTCACGCTACAACACTCACTGTGACCCCAGGCTTAATGCTTCACAGTCTCTTGAGCTTGCTTTCATCATTTCTGAACGCCTCAAAAAGAATACGATCGGGTCAAATCTGAACAATATTGATTCAACCTTGGTTTGGATTCATTCTCCAAGTTTAACTACAGAATATTGTGGTGAAAGTGTCCTTTTGGCATTGCCCACAACTGTTGAGAAACTAGTAATGGCAGACATATATAAGGACGATGGATGGATTAAGGGAAAGTTGGAAGCTGCCAGGGGTTCACAATTCCCTTTATGTGGGTTCCCTTTGTCTTCAAAAGGTTTGTCACCTCCTCGTAACTATCCTACTCCTTCACCGCACTTGATTCTGCCTCCACAGCTAAATTCACAGCTTGTGAGTTCACCTAATTCCGATTTGAGGATGACAGCTCAGCAGCTTTCAAGCAACCGACTTGTCAACTTCAGCGTGTTTATTGGAGTGAAGATGAAGATAATGGGTCTCAGACCCTTGCCGCCGCCCAAAAATCAAACTTACACACTAGTACACCGCTCTTGCGGCCGCAAGTGTCACGGCGGCGACGAGGAGATTCTCCTCAAACGCGAAGGCGAGCACAACACTAACAACGGAACCACACCGATAAAAAATTTCTGTCGAATCTCAGACCCTCTTCTCTTGTCTTCCAACTCTACTACCAAAATTGGACAAGGAACAGTCAGTGATGAATCGTCTCAATTCAAAATTCTCAGCGACGACAAGGGTTTTCATACCCACTATTTCCTCTCAATTTTTCCCCTTTTGTTTTGCTTGCCATTGCTGTGCCGGATAGAGGTAGAGAAAGAAACAAGGCCAAGGAAGAAGGAGGTGGAGGGGGGAGTGCAGTCGTGGCACGAAGATACAGAGGGATGA 2325 0.4822 MAATASNSLLCTKTLVPTLPSSSNNLNNSNQCSSFPRPRPRPIQALNNSVTVITDKKCEAKWVVDSWKSKKALQLPEYPEQEKLQSVLKSLEAFPPIVFAGEARNLEERLAQASMGNAFLLQGGDCAESFKEFHANNIRDTFRLLLQMSVVTMFGAQVPVIKVGRMAGQFAKPRSEAFEEKDGVKLPSYRGDNVNGDAFEEKTRIPDPERMIRSYSQSAATLNLLRAFATGGYAAMQRVSQWNLDFTQHSEQGDRYLELARRIDETLGFMAAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKIDPKELIRLIEILNPQNKPGRITVITRMGAENTRAKLPHLIRGVRNAGLIVCWVSDPMHGNTIKAPCGLKTRPFHSIMEEVKSFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSKMVTFDDLSSRYNTHCDPRLNASQSLELAFIISERLKKNTIGSNLNNIDSTLVWIHSPSLTTEYCGESVLLALPTTVEKLVMADIYKDDGWIKGKLEAARGSQFPLCGFPLSSKGLSPPRNYPTPSPHLILPPQLNSQLVSSPNSDLRMTAQQLSSNRLVNFSVFIGVKMKIMGLRPLPPPKNQTYTLVHRSCGRKCHGGDEEILLKREGEHNTNNGTTPIKNFCRISDPLLLSSNSTTKIGQGTVSDESSQFKILSDDKGFHTHYFLSIFPLLFCLPLLCRIEVEKETRPRKKEVEGGVQSWHEDTEG 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00904 774 Pfam Class-II DAHP synthetase family 62 498 IPR002480 GO:0003849|GO:0009073
Gma06g00904 774 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 2, CHLOROPLASTIC 47 510 - -
Gma06g00904 774 Gene3D Aldolase class I 95 503 IPR013785 -
Gma06g00904 774 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 47 510 IPR002480 GO:0003849|GO:0009073
Gma06g00904 774 SUPERFAMILY Aldolase 54 502 - -
Gma06g00904 774 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 62 503 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00904 Gma-Chr6 8337518 8346044 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00904 K01626 - gmx:100809016 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00904 06 8337518 8346044 Gma06g00904 06 8337518 8346044 ECH
Gma04g00919 04 9303509 9303790 Gma06g00904 06 8337518 8346044 GST
Gma14g01760 14 47651557 47655866 Gma06g00904 06 8337518 8346044 PCT
Gma02g01979 02 45176331 45181031 Gma06g00904 06 8337518 8346044 PCT
Gma06g00904 06 8337518 8346044 Gma14g01760 14 47651557 47655866 PCT
Gma06g00904 06 8337518 8346044 Gma02g01979 02 45176331 45181031 PCT