Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01979 ATGGCAATCTCCTCCACTTCCAACTCCCTCATTCCCACCAAATCTCTAATCCCCCAATCCCACCCCCTCATTCCCAACACCAGGCCCGCCCTCCGGCCCAAGCcCGGCCCATCCCCTTCCATCTTCGCCGTTCACGCCGCCGAGCCCGCCAAAAACCCCGTCGTCACCGACAAGCCCAAGCCCCAAGCCCAACAACCTCCCCCGGCCTCGGCCCGGGCAACGAAATGGGCCGTGGACAGCTGGAAGTCAAAGAAAGCCCTGCAGCTGCCCGAATACCCGAGCCAGGAGGAGCTGGAGTCCGTCCTCAAAACCCTCGAGGCTTTTCCTCCAATCGTCTTCGCCGGTGAGGCCAGGACATTGGAGGAGCATCTCGCCGAGGCCGCCATGGGAAATGCCTTCCTCCTCCAGGGCGGAGACTGTGCTGAGAGCTTCAAGGAGTTCAATGCCAACAACATCCGTGACACCTTCCGCATCATCCTCCAGATGAGCGTCGTCATGATGTTCGGCGGCCAAATGCCTGTCATCAAGGTGGGGAGAATGGCGGGGCAATTTGCAAAGCCTCGTTCGGATTCGTTTGAGGAGAAGAATGGCGTGAAGCTTCCGAGTTACAGAGGGGATAACATTAACGGAGACTCTTTCGACGAGAAGTCGAGGATTCCGGATCCGCAGAGGATGATTAGGGCTTATTGCCAAGCCGCGGCCACGCTGAATCTTCTCAGAGCTTTTGCCACCGGTGGTTATGCTGCTATGCAGAGGGTTACTCAGTGGAATTTGGACTTCACAGATCACAGCGAACAGGGAGATAGGTACCGAGAGCTTGCTAACCGAGTTGATGAGGCCCTTGGATTCATGGCTGCTGCTGGGCTCACGGTGGACCATCCCATAATGAGAACAACTGAATTCTGGACATCTCATGAGTGCTTATTGTTGCCTTATGAACAATCCCTCACAAGGTTGGATTCAACTTCTGGTCTCTACTATGACTGTTCAGCCCATATGATCTGGGTTGGAGAACGAACCAGGCAGCTTGATGGTGCCCATGTTGAGTTTCTAAGAGGAGTTGCTAATCCCTTGGGAATTAAGGTAAGTGACAAGATGGATCCAAATGAGCTAGTTAAACTCATTGAGATCTTGAATCCTCAAAACAAAGCAGGAAGAATTACTGTGATCACGAGGATGGGAGCTGAAAATATGAGGGTGAAGCTTCCACATCTCATCAGGGCAGTGCGCAGAGCAGGCCAAATTGTCACTTGGGTCAGTGATCCTATGCATGGAAACACCATTAAGGCTCCCTGTGGTCTTAAAACTCGCCCCTTCGATTCCATCAGGGCCGAAGTGAGAGCATTCTTCGACGTACACGAGCAAGAAGGAAGCCACCCAGGAGGGGTTCATCTAGAGATGACGGGTCAGAATGTGACCGAGTGCATTGGTGGGTCAAGGACGGTCACATTTGATGACTTGAGCTCACGTTACCACACACACTGTGACCCAAGGCTCAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATCGCTGAGCGTTTGAGAAAGAGCAGGATCAGATCGCAGCAACCTCTTGCCCCTCTAGGAGTACTGTAA 1599 0.5303 MAISSTSNSLIPTKSLIPQSHPLIPNTRPALRPKPGPSPSIFAVHAAEPAKNPVVTDKPKPQAQQPPPASARATKWAVDSWKSKKALQLPEYPSQEELESVLKTLEAFPPIVFAGEARTLEEHLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRIILQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDSFEEKNGVKLPSYRGDNINGDSFDEKSRIPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTDHSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMRTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKAGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRIRSQQPLAPLGVL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01979 532 MobiDBLite consensus disorder prediction 1 72 - -
Gma02g01979 532 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 5 527 IPR002480 GO:0003849|GO:0009073
Gma02g01979 532 SUPERFAMILY Aldolase 68 516 - -
Gma02g01979 532 Pfam Class-II DAHP synthetase family 76 512 IPR002480 GO:0003849|GO:0009073
Gma02g01979 532 MobiDBLite consensus disorder prediction 1 22 - -
Gma02g01979 532 Gene3D Aldolase class I 265 517 IPR013785 -
Gma02g01979 532 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 5 527 - -
Gma02g01979 532 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 76 518 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01979 Gma-Chr2 45176331 45181031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01979 K01626 - gmx:100797019 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01979 02 45176331 45181031 Gma02g01979 02 45176331 45181031 ECH
Gma14g01760 14 47651557 47655866 Gma02g01979 02 45176331 45181031 GST
Gma02g01979 02 45176331 45181031 Gma04g00919 04 9303509 9303790 PCT
Gma02g01979 02 45176331 45181031 Gma06g00904 06 8337518 8346044 PCT
Gma04g00919 04 9303509 9303790 Gma02g01979 02 45176331 45181031 PCT
Gma06g00904 06 8337518 8346044 Gma02g01979 02 45176331 45181031 PCT