Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00895 ATGCTCCATCAGTTCACACTCTTCGCTCCGATTTTTTCCGGCGGAAACAACGCCGGCCGTTGCTCGTTTGCCGGAAATTCGTCCGTCCGTGACGTGAGGTCGTTGAGGTTTATGAAGCAAGCATCGGGAAGACAATCGAACAATGAACATGGTGTTTTTAGCGAGACAATGGATCGTGCCAAGCATAGGGCAACTACTGCTTATGGTGGTCGTGCTCAAGAAGGTGTTCTCGAGGAAGAATCCTCCAAGGTGATAGAGAGCAGACCATCATGGAAAGCTTTTCCAGGCCAGTCATTTCCATTGGGGGTATCAGAAGTTGACAGTGGCATCAATTTTGCTATTTTTTCACAAAATGCAACTGCTGTCACACTTTGTTTAGTCCTTCCTGAGAGGGGAAGCATTGACGCATTGGATGGTGGCATGATAGAAATGGTTTTGGATCCTGATTTGAACAAAACTGGGGACATTTGGCACATATGTATTGAGGATCTTCCACGAAGCAATGTTCTGTATGGATATCGCATAGATGGACCTCGAGACTGGGGTAAGGGGCATCGATTTGATAGCAGCATTGTGCTTGTCGATCCTTATGCGAAACTAGTTGAAGGTCGAAGATATTTCGGGGATATTAGCATGAAGTTGTCTAAGTTTCTTGGCACATATGATTTTGACAGCTTGCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATATTTCTGAGAAAGATCTTGTTATATATGAGATGAATGTCCGTGCATTTACAAGTGATGAATCTAGTGGTTTGGATAGCAACATTCGTGGCAGCTACCTCGGTATGATTGAAAAGATTCCACACCTTCTAGAGCTTGGTATCAATGCAGTAGAGTTGCTGCCTGTCTTTGAGTTTGATGAGTTAGAATTCCAGAGGCGTCCAAATCCCAGAGATCACATGATTAATACATGGGGTTATTCGACAATAAATTTCTTTGCTCCTATGAGTCGCTATGCTAGTGCTGGTGGAGGATCAGTTAATGCTTCCCGAGAGTTCAAGCAAATGGTTAAATCCTTACATTCTGCTGGTATAGAGGTTATTTTGGATGTTGTCTACAATCATACTAATGAGGCTGATGATGCCTTTCCTTACACTACTTCATTTCGTGGCATAGATAATAAGGTTTATTACATGCTGGACAATAATGGGCAATTGCTGAACTTCTCTGGCTGTGGAAATACATTGAATTGTAATCATCCTGTGGTCATGGAGCTAATTCTTGACAGCCTAAGACACTGGGTCACCGAATACCATGTGGATGGATTTCGATTTGATCTTGCAAGTGTCCTGTGTCGAGGAATTGATGGCTCCCCCCTCAATGCACCCCCACTTATTAGGGCTATTGCTAAAGATGCAGTATTATCAAGATGTAAAATTATTGCAGAGCCTTGGGATTGTGGAGGTCTCTATCTTGTTGGGAGTTTTCCTAATTGGGATCGGTGGGCTGAATGGAATGGGAAATATCGTGATGATGTACGGAAATTTATTAAGGGTGATTCTGGTGTGAAGGGGAGCTTTGCAACTCGTGTAGCTGGGTCTTCTGATCTTTACAGTGTGAACAATCGTAGGCCATATCATGGTATTAACTTTGTTATTGCACATGACGGATTCACCTTGCGTGATCTTGTTTCATACAATTTCAAGCACAATGAAGCCAATGGGGAAGGTGGAAATGACGGAAGCAATGATAATTTTAGTTGGAATTGTGGTTTGGAAGGGGAAACTGATGATGCTAGTGTAAGAGCTTTGCGATCACGGCAAATGAAAAACTTCCATTTGGCATTAATGATATCTCAGGGTACACCAATGATGCTAATGGGGGATGAATATGGCCATACTCGCAATGGAAATAACAATAGTTATGGGCATGATACTGCCATTAATAATTTTTTGTGGGATCAGTTGGATGCACGGAAGAGTGATCACTTCCGGTTTTTCTCAAACATGATAAAGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCCAGAACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTTCTTGCATTCACGCTTCATGACAAGAGCGGGGGAGATATCTATTTGGCATTTAATGCTCACGATTACTTTGTCAAAGTTCTGCTGCCGGCACCTCCAAAAAAGAGAAACTGGTTTCGTGTGGTGGACACTAATCTCAAATCACCGGATGACTTTGTCCTTGATGGTGTCCCTAACGTAGGAAACACGTACAATATAGCTCCATACTCCTCCATTCTTCTTGAGGCGAAGTTTTGA 2319 0.4256 MLHQFTLFAPIFSGGNNAGRCSFAGNSSVRDVRSLRFMKQASGRQSNNEHGVFSETMDRAKHRATTAYGGRAQEGVLEEESSKVIESRPSWKAFPGQSFPLGVSEVDSGINFAIFSQNATAVTLCLVLPERGSIDALDGGMIEMVLDPDLNKTGDIWHICIEDLPRSNVLYGYRIDGPRDWGKGHRFDSSIVLVDPYAKLVEGRRYFGDISMKLSKFLGTYDFDSLPFDWGENYKLPNISEKDLVIYEMNVRAFTSDESSGLDSNIRGSYLGMIEKIPHLLELGINAVELLPVFEFDELEFQRRPNPRDHMINTWGYSTINFFAPMSRYASAGGGSVNASREFKQMVKSLHSAGIEVILDVVYNHTNEADDAFPYTTSFRGIDNKVYYMLDNNGQLLNFSGCGNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRGIDGSPLNAPPLIRAIAKDAVLSRCKIIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDVRKFIKGDSGVKGSFATRVAGSSDLYSVNNRRPYHGINFVIAHDGFTLRDLVSYNFKHNEANGEGGNDGSNDNFSWNCGLEGETDDASVRALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRNGNNNSYGHDTAINNFLWDQLDARKSDHFRFFSNMIKYRHAHEVFNHESFLSQNDITWHEDNWDNHDSKFLAFTLHDKSGGDIYLAFNAHDYFVKVLLPAPPKKRNWFRVVDTNLKSPDDFVLDGVPNVGNTYNIAPYSSILLEAKF 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00895 772 Gene3D - 679 772 IPR013780 -
Gma06g00895 772 SUPERFAMILY E set domains 95 232 IPR014756 -
Gma06g00895 772 Gene3D Glycosidases 224 678 - -
Gma06g00895 772 CDD AmyAc_Glg_debranch 228 667 - -
Gma06g00895 772 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 100 198 IPR004193 GO:0004553|GO:0005975
Gma06g00895 772 Gene3D Immunoglobulins 81 218 IPR013783 -
Gma06g00895 772 SUPERFAMILY (Trans)glycosidases 227 670 IPR017853 -
Gma06g00895 772 SUPERFAMILY Glycosyl hydrolase domain 678 771 - -
Gma06g00895 772 PANTHER GLYCOGEN DEBRANCHING ENZYME 74 770 - -
Gma06g00895 772 SMART aamy 248 655 IPR006047 GO:0005975
Gma06g00895 772 CDD E_set_GDE_Isoamylase_N 99 248 IPR044505 -
Gma06g00895 772 Pfam Alpha amylase, catalytic domain 269 624 IPR006047 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00895 Gma-Chr6 8244629 8258765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00895 52 771 Glycoside Hydrolase AT4G09020 76.593 0.0 1177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00895 K01214 - gmx:100806342 1583.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00895 06 8244629 8258765 Gma06g00895 06 8244629 8258765 ECH
Gma04g00909 04 9135880 9156435 Gma06g00895 06 8244629 8258765 GST