Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00887 ATGGCCCAGCAAAAGCGGTTAAGAGGTCTGGCTCAAAACCTCAAAGACAAAGCCTCGGTGATCGCCGCAGCGCTATCCACCAAGCGTCACCTCTCCTCCGTCCGTGTTCACGTGCTCCGCGCCACCACGCACGCCCTCGCGGCACCACCCTCCGAGGAAACAATTTCTGCTGTCCTCGCGGTCGGGCACGGCGGCTCCCACCGTCATCCGCGCGCGTGCATCGACACTCTCATGGACCGCCTCCACACCACGCGCAGCGCCACCGTGGCACTCAAATGCCTCTACACTCTCCACAACGTCGTCGTAAAGGGACCCTTCGTATTGAAAGACCAACTATCTTGTTACCCTTCTTACGGTGGCCACAATTTTCTTAACCTCTCCACCTTCCGAGACGTCTCGGACTTGGAATCGCTCGAACTCAGTTCGTGGGTGCGCTGGTACGCCGCCGTACTGGAACAGACCTTAACCGTTTCAAGAATCTTAGGTTATTACTTGAACGATTCTTGTGAATCCCAAGAAAAAAAGAAGACTTTGGTTGTTTCGAACGCGTCGAATGCGGATTTGTTGTATAAGTTGGAGGTTCTCGTGGGTTTCGTCGAACAAATAGGCCACGTGCCTGATTCGTTGCACCTTCAGAGGAACGAGTTGGTGTACGAGGTTGTGAGATTGGTCGGGGAGAATTATAGGAGCGTTCAAGGTGAGATTTTTTTGCGTGTTGAGGAGCTTGGGGAAAGAATAATGGAGGATTTTGATGTGGGTGAGTTGAACGAGTTGGTGGGGTATTTGGGGAGATTGGAAGAGAGTCGTGAAAAGTTGTTGCTTTTGTTTGTGAATAGAAGAAAGAATAATGGGTTTTGGGAATTGGTTGAGAAGACGAAGGGGAAGGGTGTGGCGAAGAAGAAGGAGATTGAAGGGAAGTGGCTCGCGGTGGTGGTGAGTGGCAACGCCGCCGAGTTGACTCGGTCCACGAACCCGTTTCTTGACCCGGGGCAACAACTCAGTCCGGTCCCCCGGTTAAGTTTTGCAACGGTAAGGTGA 1038 0.527 MAQQKRLRGLAQNLKDKASVIAAALSTKRHLSSVRVHVLRATTHALAAPPSEETISAVLAVGHGGSHRHPRACIDTLMDRLHTTRSATVALKCLYTLHNVVVKGPFVLKDQLSCYPSYGGHNFLNLSTFRDVSDLESLELSSWVRWYAAVLEQTLTVSRILGYYLNDSCESQEKKKTLVVSNASNADLLYKLEVLVGFVEQIGHVPDSLHLQRNELVYEVVRLVGENYRSVQGEIFLRVEELGERIMEDFDVGELNELVGYLGRLEESREKLLLLFVNRRKNNGFWELVEKTKGKGVAKKKEIEGKWLAVVVSGNAAELTRSTNPFLDPGQQLSPVPRLSFATVR 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00887 345 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 334 - -
Gma06g00887 345 Pfam ANTH domain 35 188 IPR011417 GO:0005543
Gma06g00887 345 SUPERFAMILY ENTH/VHS domain 34 162 IPR008942 -
Gma06g00887 345 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 334 IPR045192 GO:0048268|GO:0072583
Gma06g00887 345 CDD ANTH_N_AP180_plant 35 158 - -
Gma06g00887 345 Gene3D - 6 164 IPR008942 -
Gma06g00887 345 ProSiteProfiles ENTH domain profile. 26 165 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00887 Gma-Chr6 8188951 8190307 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00887 - - gmx:100788852 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00887 06 8188951 8190307 Gma06g00887 06 8188951 8190307 ECH
Gma04g00899 04 9011407 9012432 Gma06g00887 06 8188951 8190307 GST
Gma14g01783 14 48008649 48010032 Gma06g00887 06 8188951 8190307 PCT
Gma06g00887 06 8188951 8190307 Gma14g01783 14 48008649 48010032 PCT