Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00899 ATGGCCCAGCAAAATCGATTAAGAAATTTGGCTCAAAGCCTCAAAGACAAAGCCTCAGTAATCGCTGCAGCGCTATCCACGAAGCGACACGTGTCCTCCGTCCGCGTGCACGTGCTCCGCGCCACCACGCACGCCCTCGCCGCGCCGCCCTCCGAGGAAACAATCTCCGCCGTCCTCGTGGTCGGGTCCCACCAGAAGCGCCACCCTCGCGCTTGCATCGACGCGCTAATGGACCGCCTCCACAGCACGCGCAGCGCCACCGTGGCACTCAAATGCCTCTACACACTCCACAACGTCGTCGTAAAGGGACCCTTCATTTTGAAAGACCAACTCTCCTGTTACCCTTCCTACGGTGGCCACAATTTCTTGAACCTCTCCACCTTCCGAGACGGCTCGGACTTGGAATCGCTCGAACTCAGTTCGTGGGTTCGCTGGTACGCGGGAGTGTTGGAACAGAGCTTAACCGTTTCAAGGATCTTAGGTTATTACTTGAACCACTCTTGCGAGTCCCAAGAAAAGAAAAAGACTTTGGTTTCGAAGGCGTCGAATGCGGATTTGTTGTATAAGTTGGAGGCTCTCGTGGGTTTCGTCGAACAAACAAGCCACGTTCCAGATTCGTTGCACCTTCAGAGGAACGAGTTGGTGTACGAGGTTGTGAGATTGGTGGGGGAGAATTATAGGAGCGTGCAAGGTGAGATTTTGATGCGTGTTGAGGAGCTTGGGGGAAGAATAATGGAGGACGTGGGTGAGTTGAACGAGTTGGTGGGGTATTTGGGGAGATTGGAGGAGACTCGTGAAAAGTTGGTGCTTTTGTTTGTGAATAGGGGAAAGAACAATGAGTTCTGGGATTCGGTTAAGAAGACCAAGGAGAAGGGTGTGGCGAGGAAGAAGGAGATTGAAAGGAAGTGGCTCGCGGTGGTGGTGGTGGCAGGGAACGCCGCCGAGTTTACTCGGTCCACCAACCCGTTTCTTGACCCGGGGCAACTCAGTCCGGTCCCACGGTTAAGTTTTGCAACGGTAAGGTGA 1026 0.54 MAQQNRLRNLAQSLKDKASVIAAALSTKRHVSSVRVHVLRATTHALAAPPSEETISAVLVVGSHQKRHPRACIDALMDRLHSTRSATVALKCLYTLHNVVVKGPFILKDQLSCYPSYGGHNFLNLSTFRDGSDLESLELSSWVRWYAGVLEQSLTVSRILGYYLNHSCESQEKKKTLVSKASNADLLYKLEALVGFVEQTSHVPDSLHLQRNELVYEVVRLVGENYRSVQGEILMRVEELGGRIMEDVGELNELVGYLGRLEETREKLVLLFVNRGKNNEFWDSVKKTKEKGVARKKEIERKWLAVVVVAGNAAEFTRSTNPFLDPGQLSPVPRLSFATVR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00899 341 SUPERFAMILY ENTH/VHS domain 34 161 IPR008942 -
Gma04g00899 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 332 IPR045192 GO:0048268|GO:0072583
Gma04g00899 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 332 - -
Gma04g00899 341 Gene3D - 5 163 IPR008942 -
Gma04g00899 341 CDD ANTH_N_AP180_plant 35 157 - -
Gma04g00899 341 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Gma04g00899 341 Pfam ANTH domain 35 197 IPR011417 GO:0005543
Gma04g00899 341 SMART enth_2 32 164 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00899 Gma-Chr4 9011407 9012432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00899 - - gmx:100804881 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00899 04 9011407 9012432 Gma04g00899 04 9011407 9012432 ECH
Gma04g00899 04 9011407 9012432 Gma06g00887 06 8188951 8190307 GST
Gma14g01783 14 48008649 48010032 Gma04g00899 04 9011407 9012432 PCT
Gma04g00899 04 9011407 9012432 Gma14g01783 14 48008649 48010032 PCT