Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00796 ATGACGTCTTCTAAGAGGCCTAATGCGGGGCCGAATGGGAGAGGGAAACGCCGGAGATCTTCTGGCGGTTTTTCGTCGTTGGGTGTTTCTCCGGGGAGCGTTGTGTTCCGTTTGCTCTGTCATGCTTCTAGAATTGGCGGTGTTATTGGCAAAGGTGGTTCCATCATATCGCAAATTCGCCAAGAAACTGGCGTGAAACTTAGGATCGAGGAAGCTGTTCCCGGGTGTGATGAAAGGGTTATCACTATCTCAGGTTCTGAAAAAGAGACTGAAGAAGATAACACTGAGCAGGGAAAGGAGGTTAATGATAATGATGATGGTGGAAGCGAGGGGAAGGATCGGGAGGAGAAGGATGATGGCGATGGTAATGAAGATAAAAGAGAAAAAGATGCCGTTCCCGTTGAAGATTCAAAGAGCGAGAAGGGGAATTCGGCTATTTGGAAGGCTATATCACTAGTTTTTGAGAGGATGGTTGAGGGAGTAGAGGAGACAACTGAAGGAGATGAAGAAAGTAATAAACCTTCTTCCTTTTTTTTGAGGCTACTTATTCTTACTGCTCAAGTTGGTTGTGTTCTAGGAAAGGGTGGTAGTGTGATAAAGAGAATGGCAGCTGAGAGTGGTGCACAGATTCGGATCCTTCCTAAAGACAAGCTTCCAGCGTGTGCATCGGCTTCTGATGAGATAGTTCAGATCTCAGGAAGTGTAGAAGTTGTCAGGAAAGCTCTTCAATCTGTTTCTCAACAACTTTTGGAAAATCCGCCTCGGGATCATGATTCCCTGTCCGCCAAGTCTACTGGGCCGTCGTCTCATTCATTTGGGCAATTCCCACCACACAACCGTTCTTTTTCTGCTCAAGGAGAACCTTTTGCTAGTGGTCCTCATGATATTTCTGCTTTTCATTCTGCCGCTCCTCTGATTCCCAAGTTTCATGAAGCTGCCATCCACGGTCGCATGAGGCCTTTACAAGAAATGCTTACTTTTCGTTTATTGTGTCCTGCGGAGAGGGTAGGAAATATAATTGGCAAAGGTGGAGCAATCATAAAGACCGTGCAGCAAGAGACAGCAAGTGAGATCAAGGTTTTAGAAGCCCCTCCAGATTCAGAGGACTGTGTTATTGTTATATCTGGTCCAGCGCACCCAGAGGATAGAATATCCCCTGTGCAAGAGGCTGTATTTCGTGTGCAAACTAGAATAGCCAAGCCTATACCTGATGCCAAAGACCATATTATGTTAGCAAGGTTTCTGGTTTCTTCCACTCAAATAGGTTGTCTTCTTGGCAAGGGTGGTTCCATCATTACTGAAATGAGGAAGAAATCAGGGGCCCATATCCGTATATTAGGAAAGGATAAGGTTCCAAAGTGTGCTTCAGAGGATGAAGAAGTAATTCAGGTGAATGGAGAAATTGAGGCAGTGCATGATGCTCTCTTGCAAATAACCACTAGATTAAAACATCATTTCTTTCGCGATTCATATCCATCTGTCAATTATCCTTCAAATTCTCCATTTCTGGATCAACTTCCTCCATTCCCACCTTATTTAGGAAGAAGGGGACTTTCACCTCCTAGGATGTATTCTGACCTTGGTCATCCACATCCACACGCGGGCTTTCCTCTTGATGATCGCCCTCCTTTCTTGAATAGTATACATAGACCAGGCCTTCCTCCTCACATATCTGAAAGGAAGCCTTGGGGTCCACAGGGGATACTTGAAGGTGGCATACCCATTGGCttgccagactttccaggaggtcctcctagaagaatttcaggatttgcaggGGGGAGCCAACCAATTATCACAAGTACCACTGTTGAAGTTGTTGTTCCTCGAGCAGTGGTGCCTGTAATATATGGGGAAGATGGTGAATGCCTAAAACAAATACTTCAGATTTCTGATGCAAACATTACTATTACTGATCCAAAGCCTGGAACTGTGGAAACTAAAATTATAATATCTGGAACCCCTGAGCAAACTCATGCTGCCCAAAGTCTTATTCAGGCATTTGTCATGAGTGAGAGGGAGTCAGTTTGA 2031 0.4382 MTSSKRPNAGPNGRGKRRRSSGGFSSLGVSPGSVVFRLLCHASRIGGVIGKGGSIISQIRQETGVKLRIEEAVPGCDERVITISGSEKETEEDNTEQGKEVNDNDDGGSEGKDREEKDDGDGNEDKREKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKPSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIRILPKDKLPACASASDEIVQISGSVEVVRKALQSVSQQLLENPPRDHDSLSAKSTGPSSHSFGQFPPHNRSFSAQGEPFASGPHDISAFHSAAPLIPKFHEAAIHGRMRPLQEMLTFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPEDRISPVQEAVFRVQTRIAKPIPDAKDHIMLARFLVSSTQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKHHFFRDSYPSVNYPSNSPFLDQLPPFPPYLGRRGLSPPRMYSDLGHPHPHAGFPLDDRPPFLNSIHRPGLPPHISERKPWGPQGILEGGIPIGLPDFPGGPPRRISGFAGGSQPIITSTTVEVVVPRAVVPVIYGEDGECLKQILQISDANITITDPKPGTVETKIIISGTPEQTHAAQSLIQAFVMSERESV 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00796 676 ProSiteProfiles Type-1 KH domain profile. 324 391 - -
Gma06g00796 676 CDD PCBP_like_KH 413 479 - -
Gma06g00796 676 MobiDBLite consensus disorder prediction 82 137 - -
Gma06g00796 676 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 601 670 IPR036612 GO:0003723
Gma06g00796 676 Gene3D K Homology domain, type 1 323 401 IPR036612 GO:0003723
Gma06g00796 676 MobiDBLite consensus disorder prediction 78 140 - -
Gma06g00796 676 CDD PCBP_like_KH 178 246 - -
Gma06g00796 676 CDD PCBP_like_KH 35 86 - -
Gma06g00796 676 ProSiteProfiles Type-1 KH domain profile. 33 102 - -
Gma06g00796 676 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 2 537 - -
Gma06g00796 676 MobiDBLite consensus disorder prediction 1 26 - -
Gma06g00796 676 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 2 537 - -
Gma06g00796 676 MobiDBLite consensus disorder prediction 249 271 - -
Gma06g00796 676 Gene3D K Homology domain, type 1 174 254 IPR036612 GO:0003723
Gma06g00796 676 Gene3D K Homology domain, type 1 409 485 IPR036612 GO:0003723
Gma06g00796 676 ProSiteProfiles Type-1 KH domain profile. 409 478 - -
Gma06g00796 676 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 317 379 IPR036612 GO:0003723
Gma06g00796 676 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 406 491 IPR036612 GO:0003723
Gma06g00796 676 Gene3D K Homology domain, type 1 32 94 IPR036612 GO:0003723
Gma06g00796 676 ProSiteProfiles Type-1 KH domain profile. 601 665 - -
Gma06g00796 676 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 30 89 IPR036612 GO:0003723
Gma06g00796 676 CDD KH-I 616 666 - -
Gma06g00796 676 Pfam KH domain 326 378 IPR004088 GO:0003723
Gma06g00796 676 Pfam KH domain 603 666 IPR004088 GO:0003723
Gma06g00796 676 Pfam KH domain 413 478 IPR004088 GO:0003723
Gma06g00796 676 Pfam KH domain 180 245 IPR004088 GO:0003723
Gma06g00796 676 Pfam KH domain 36 90 IPR004088 GO:0003723
Gma06g00796 676 CDD PCBP_like_KH 326 395 - -
Gma06g00796 676 SMART kh_6 323 399 IPR004087 GO:0003676
Gma06g00796 676 SMART kh_6 32 106 IPR004087 GO:0003676
Gma06g00796 676 SMART kh_6 600 670 IPR004087 GO:0003676
Gma06g00796 676 SMART kh_6 175 250 IPR004087 GO:0003676
Gma06g00796 676 SMART kh_6 408 483 IPR004087 GO:0003676
Gma06g00796 676 ProSiteProfiles Type-1 KH domain profile. 176 245 - -
Gma06g00796 676 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 168 253 IPR036612 GO:0003723
Gma06g00796 676 Gene3D K Homology domain, type 1 600 674 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00796 Gma-Chr6 7232736 7241823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00796 K21444 - gmx:100785136 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00796 06 7232736 7241823 Gma06g00796 06 7232736 7241823 ECH
Gma04g00802 04 7666584 7671610 Gma06g00796 06 7232736 7241823 GST