Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00758 ATGGCTTTCACCTTCTCGCCTTCAATCAGAAACTCCATTTCATGGCCAACTATGCTTGTTCCTGACATGCCTGATATCAATATCTCACTTCGAAATAAAGGCATCTACAAAGGGAAACGCAATATTAATCTGCGAGACTTGACCAAGGCAAATGTTGCAAGTCCATCATTACCTTTGATTGCCCCACCAACACCCGAGGAACGCCCAGGAATCACCCATGACTGCCACCACCACCACCATGTTGCATGGACTAGTATCCCGCAAGAGAGATGGGAAGGAGAGTTACAAGTTCAAGGGCAAATACCATTATGGCTGGAAGGAACGTACCTAAGGAATGGTCCGGGCATGTGGCACATAGGGGACTACAACTTCCGGCACCTCTTCGACGGTTACGCCACCCTGGTGAGGCTCGGTTTCCGGAACGGCCGGCTAGTCGCGGGGCACCGGCAAATCGAGTCGGAGGCGTACCGGGCGGCGAAGAAGAACAAGAAGATATGTTACAGGGAGTTCTCCGAGGTGCCTAAGGCTGCGAATTTCCTGGCCTACGTGGGGGAGCTGGCGAGCCTGTTCTCTGGCGCTTCCCTGACCGACAACGCGAACACCGGCGTGGTGAAACTCGGCGACGGCAGGGTGGTGTGCCTTACGGAGACTCAGAAAGGGTCCATAGTGATAGACCCTGAGACGTTGGAGACAGTGGGGAAGTTTGAGTACAGTGACTCGTTGGGGGGTCTTATTCACTCCGCACATCCCATTGTGACGGATGAAGAGTTTTTGACGTTGTTGCCTGATTTGGTGAgagcagggtaccttgttgttaggatggagcctggtaccaatgagaggagggtcattggaagggtcaattgtaggggtgggcctgcacctggttgggttcattcttttcctgttactcaacattatgttgttgtgcctgaaatgccgttgaggtactgtgctcagaatttgctcaaagctgaacctactcctttgtacaagtttgagtggcaccctgaatccagagcttttatgcatgtaatgtgcaagactagtgggaaaattgtggcaagtgtggaagtgcctctgtttgttactttccatttcataaatgcgtacgaggagcaagatgaagatgggagggtgacggccattattgctgactgttgtgagcacaattcagatactaccattcttgataggcttaggttgcagaaccttcgttcgtttaatggtgaagatgttctacctgatgctagggttgggcggtttagaataccactggatggaagtccatatggaacattagatgcagcattggagccgaatgaacatgggagaggcatggacatgtgcagcatAAACCCTAATTATTTAGGGAAGAAATACAGATATGCATATGCTTGCGGAGCACAAAGACCTTGtaactttcccaacaccctcaccaagCTTGATTTTGAATTAAAGAAGGCTAAGAACTGGCATGAAGAAGGTGCAGTGCCCTCAGAACCCTTCTTTGTGGCACGACCAGGAGCAACAGAGGAAGATGATGGCGTAGTCATCTCCATTGTCAGTGAGAAAAATGGAGAAGGATTTGCGTTGGTGTTAGATGGTTCCACTTTTGAAGAGATTGCTAGGGCCAAATTCCCCTATGGACTTCCATATGGGTTGCATGGATGCTGGGTTCCAAAAGAGTAA 1692 0.331 MAFTFSPSIRNSISWPTMLVPDMPDINISLRNKGIYKGKRNINLRDLTKANVASPSLPLIAPPTPEERPGITHDCHHHHHVAWTSIPQERWEGELQVQGQIPLWLEGTYLRNGPGMWHIGDYNFRHLFDGYATLVRLGFRNGRLVAGHRQIESEAYRAAKKNKKICYREFSEVPKAANFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPETLETVGKFEYSDSLGGLIHSAHPIVTDEEFLTLLPDLVRAGYLVVRMEPGTNERRVIGRVNCRGGPAPGWVHSFPVTQHYVVVPEMPLRYCAQNLLKAEPTPLYKFEWHPESRAFMHVMCKTSGKIVASVEVPLFVTFHFINAYEEQDEDGRVTAIIADCCEHNSDTTILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGTLDAALEPNEHGRGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKLDFELKKAKNWHEEGAVPSEPFFVARPGATEEDDGVVISIVSEKNGEGFALVLDGSTFEEIARAKFPYGLPYGLHGCWVPKE 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00758 563 PANTHER BETA-CAROTENE DIOXYGENASE 75 562 IPR004294 GO:0016702
Gma06g00758 563 Pfam Retinal pigment epithelial membrane protein 88 561 IPR004294 GO:0016702
Gma06g00758 563 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 75 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00758 Gma-Chr6 6876783 6880334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00758 K17913 - gmx:100794831 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00758 06 6876783 6880334 Gma06g00758 06 6876783 6880334 ECH
Gma04g00766 04 7236167 7240093 Gma06g00758 06 6876783 6880334 GST