Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00766 ATGGCTTTCACCACCTTGCCTTCAATCAGAAACTCCATTTCATGCCCAACTATGCTTGTTCCTGACATGCCTCATAATAATATTTCTCTTCGAAATAAAGGCTTCATCTACAAAGGGCAACACGGTATTAATCTCCGAGACTTCACCAAGGCAAATGTTGCAAGTCCATCATTACCTGTGATTGCCCCACCAACACCGGAGGAACGGAAAGAAACCACCGCCGACGACCGCCATCACCACCACCACCACGTTGCATGGACTAGTATCCCGCAAGAGAGGTGGGAAGGAGAGTTACAAGTTCAAGGAAAAATTCCATTATGGCTGAAAGGAACGTACCTAAGGAATGGTCCGGGCATGTGGCACATAGAGGACTACAACTTCCGGCACCTCTTCGATGGTTACGCCACGCTGGTGAGGCTCGGTTTCCAGAACGGGCGGTTAGTCGCCGGGCACCGGCAGATTGAGTCGGAGGCGTACCGGGCGGCGAAGAAGAACAAGAAAATATGTTACCGAGAGTTCTCCGAGGTGCCTAAGGCGGCGAATTTCCTGGCCTACGTGGGGGAGCTGGCGAGCCTGTTCTCCGGCGCGTCGTTGACCGACAACGCGAACACCGGCGTGGTGAAGCTCGGTGACGGCAGGGTGGTTTGCCTGACGGAGACTCAGAAAGGGTCCATAGTGATAAACCCTGAGACGCTGGAGACAGTGGGGAAGTTTGAGTACAGTGACTCATTGGGGGGTCTTATTCACTCTGCACACCCCATTGTGACGGATAACGAGTTTTTGACGTTGTTGCCTGATTTGGTGAgagcagggtaccttgtggtgaggatggagcctggcaccaatgagagaagggtcattggaagggtcaactgtaggggtggtcctgcacctggttgggtccattcttttcctgttactgaacactatgttattgtgcctgaaatgccgttgaggtattgtgctcagaatttgctcaaggctgagcctactcccttgtacaagtttgagtggcaccctgagtccaaagcttttatgcatgccatgtgcaagactagtgggaaaattgtggcaagtgtggaagtgcctctgtttgttactttccatttcataaatgcgtatgaggagcaagatgaagatgggagggtgacggcgattattgccgactgttgtgagcataattccgatactaccattcttgataggcttaggttacagaaccttcgttcatttaatggtgaagatgttctacctgatgctagggttggtcggttcagaataccactggatggaagtccatatggaacactagaggcagcattggagccaaatgaacatgggagaggcatggacatgtgcagcatAAACCCTAATTATTTAGGGAAGAAATATAGATACGCATATGCTTGTGGAGCACAGCGACCTTGTAACTTTCCCAACACCCTCACCAAGCTTGATTTTGAATTGAAGAAGGCTAAGAACTGGCATGAAGAAGGTGCTGTGCCCTCAGAACCCTTCTTTGTGGCACGACCAGGAGCAACAGAGGAAGATGATGGCGTGGTAATCTCAATTGTCAGTGAGAAAAATGGAGAAGGATATGCGTTGCTGTTAGATGGTTCCACCTTTGAAGAGATTGCTAGGGCCAAATTCCCCTATGGACTTCCATATGGGTTGCATGGATGCTGGGTTCCAAAAGAGTAG 1701 0.3386 MAFTTLPSIRNSISCPTMLVPDMPHNNISLRNKGFIYKGQHGINLRDFTKANVASPSLPVIAPPTPEERKETTADDRHHHHHHVAWTSIPQERWEGELQVQGKIPLWLKGTYLRNGPGMWHIEDYNFRHLFDGYATLVRLGFQNGRLVAGHRQIESEAYRAAKKNKKICYREFSEVPKAANFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVINPETLETVGKFEYSDSLGGLIHSAHPIVTDNEFLTLLPDLVRAGYLVVRMEPGTNERRVIGRVNCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAQNLLKAEPTPLYKFEWHPESKAFMHAMCKTSGKIVASVEVPLFVTFHFINAYEEQDEDGRVTAIIADCCEHNSDTTILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGTLEAALEPNEHGRGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKLDFELKKAKNWHEEGAVPSEPFFVARPGATEEDDGVVISIVSEKNGEGYALLLDGSTFEEIARAKFPYGLPYGLHGCWVPKE 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00766 566 PANTHER BETA-CAROTENE DIOXYGENASE 46 565 IPR004294 GO:0016702
Gma04g00766 566 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 46 565 - -
Gma04g00766 566 MobiDBLite consensus disorder prediction 68 83 - -
Gma04g00766 566 MobiDBLite consensus disorder prediction 56 83 - -
Gma04g00766 566 Pfam Retinal pigment epithelial membrane protein 91 564 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00766 Gma-Chr4 7236167 7240093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00766 K17913 - gmx:100814148 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00766 04 7236167 7240093 Gma04g00766 04 7236167 7240093 ECH
Gma04g00766 04 7236167 7240093 Gma06g00758 06 6876783 6880334 GST