Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00611 ATGGACTTAGAAGGAAGTGAAAAGGATTCAGTGGTTACTCAGATTAGCATTGGCGGATTTGGCAGTGAGGTCAAAGCAAGTGATCTCGTGAATTACTTGGAGGATAAAATTGGACTTGTGTACAGGTGTAGGTTGAAGACTTCTTGGACCCCTCCAGAGTCATATCCAGAATTTAATATCATTGATACTGCAAATATTAGAAGAACGGATAACTATAAGAAGGTGGAGCCCCATGCCTTTGTGCATTTTGCATCTCCGGAATCTGTGACTGCAGCCCTGAATGCTTCAGGTTGTTGTGATCTATTTTTGAAGAATCAACCCTTAAAGGTCAGCTGTGGGCCTGAAAATCCATACTTCCTGAACCAAAGGAGGAGAACTACAACTCCTTTTAAGATGTCTGATGTACTTGTTGAAATTGGGACTTTGGTTAGCCCAGGGGAGTTTTTTGTTTCTTGGAGAGGACCTGATAAAGGTGTAAAATTTCTTGTGGATCCCTTTGATGGCATGTGCAGGTTTTGTTTCAGTAGGGATACTGCATTCTCATTCAAAGGGATAGAAAAAAAAGCAGTGATAAAGTGTGATTTTCAGGTGGGATTCCTGGTTAGAGACATTAATGAGATCAAGAGATATAATGATACATCATATCTCGTTGTTTTATTGCACCTAGCTTCTTCACCTTGGGTTTGGTACAGAACTGCCGATGATGACATTGAAGAATCAGTACCATTTGATTTGCTAGATGATGATGATCCTTGGATTAGAACCACTGATTTTACTCCCAGTGGGGCAATTGGTCGATGCAATTTTTATAGAATTTCAATCCCACCTCGCCATGGTGCAAAATTGATGAAGGCCATGCTTTATCTGAAAGGTCAAAGAGTGCAAATGCAAGAACTTGCACTTAAACAGACACTTAGGACACTGAATGAACCTGATTTTGGTGTGCCCATGTCAGATGCTTTCTTCTATATACATTTTCAGAAGGACATTGCTTTTGACATAATGTTTTTGGTCAATGCTATTGTACATAAAGGCATATTCAATCAGCACAGGTTGTCGGATAGGTTTTTTGAATTGCTGAAAAATCAACCTAAGGAGCTCAATGTGGCTGCCCTGAAGCATTTATGTTCTTACAAGCGCCCAGTATTTGATGCAACTAAGAGGCTAAAAATAGTCCAAGAATGGTTGCTCAGAAATCCTAAACTTTATCAGATCTCTAAACAGTTGGATGATATTGTTGAGGTTAGAAGATTGGTTATTACTCCATCAAAAGCCTATTGTATACCGCCTGAAGTTGAATTGTCCAACAGGGTTCTCAGAAAATTCAGAGAAGTTTCAGATTGTTTCTTGAGAGTCACCTTTATGGATGAAGGCATGCAAACAATTAATGTGAATGCTCTTAACTATTATGTTGCTCCTATAGTGAAGGAAATCACATCGAATTCTTTCTCTCAAAGGACAAAAATATATAAAAGGGTCAAGACTATCTTGGAACAGGGATTTTACTTTTGTGGCCGAAAATATTCATTTTTAGCCTTTTCATCCAATCAACTTAGAGATAGATCTGCTTGGTTTTTTGCTGAAGACAAAATAAGATGTGATGATATACGAAATTGGATGGGCAAGTTTAATCAGAGGAATGTTGCAAAATGTGCTGCTAGGATGGGACAATGCTTCTCGTCTACTTATGCAACAGTTGAAGTTGCTGCAAATGAAGTTAACTCCATGCTACCTGATGTTGAGAGGAACAATTACATTTTCTCTGATGGTATTGGTGTTATCACTCATGATCTTGCAAGGGAAGTTGCAGAAAAGTTGAAGTTGGACAATGTACCCTCTGCTTACCAGATCAGATATGCTGGTTTTAAAGGGGTTGTGGCCTCTTGGCCGGCCAAAGGGGATGGAGTCAGACTTTCTTTGAGGCCTAGTATGAACAAGTTTCAATCTACTCATAATATCTTGGAGATCTGTGCTTGGACCAGGTTTCAGCCTGGTTTTCTTAACCGGCAGATTATAACATTGCTTTCAGCACTGGGTGTGCCTGATGAAGTATTTTGGCAAATGCAGGAGGCAATGCTTTTGAAGTTAAATCAAATGCTTGTGGATGCAGATATTGCTTTCGATGTTCTTACCAAATCATGTGCTGAGCATGGGAATGCTGCAGCAATAATGTTAAGTTGTGGCTTCAGTCCCCTAACAGAACCTCATCTTAGAGGAATGCTAACTTCTACACGTGCTGCGCAGCTTTGGGGACTTAGAGAAAAGTCCAGGATTTTTGTATCGTCTGGGAGATGGTTGATGGGTGTCTTAGATGAGTCGGGCGTGCTTGAACAAGGGCAGTGCTTTGTTCAAGTGTCTACTCCTTCTCTTGAAAATTGTTTCTCAAAGCATGGTTCAAGATTTTCAGAGACAAAGAACCTGCATGTAGTTAAAGGTTTTGTGATTATAGCAAAAAATCCTTGCCTTCATCCAGGAGATGTAAGAGTTTTGGAGGCAGTTGATGCCCCCGATTTACATCATTTAAATGATTGTCTTGTTTTCCCTCAAAAGGGTGACAGACCCCATACAAATGAAGCTTCTGGAAGTGACCTTGACGGGGATTTATATTTTGTCACATGGGATGAAAATCTCATTCCACCAAGTAAGAGGAGCTGGATACCTATGGAGTATGCCCCTCAAGAAAGCAAACTTAAGACACGTCAAGTGATGACCCGAGACATCATAGAATTTTTTGTCAGAAACATGGTAAATGAACATTTGGGTGCAATCTGCAATGCACATGTGGTACATGCCGATTCCAGTGACTACGGTGCCTTGGATGAGAAATGCATACACTTGGCCGAGCTAGCAGCCACTGCTGTTGATTTTCCAAAGACCGGGAAGCTTGTCACTATGCCTCCTCATCTGAAACCAAAATTGTACCCTGATTTCATGGGGAAAGAGCGGCACCAGTCTTACAGGTCGAAGAAAATCCTGGGTAGACTTTACCGGCGTATCAAAGATGCTTATGATGAAGATATTGATGCTCCCTATTTGAACTTTGTGACTGGCGATATACCGTATGATAAAGATCTTGAAGTTCCAGGATCTGCTGATTTTATTGCTGATGCGTGGGAGCAAAAATGCTCATATGATGGCCAATTGAGTGGGCTACTTGGACAATACAAAGTGAAAAGAGAAGAGGAAGTTGTTACTGGACAGATTTGGTCTATGCCAAAATACAACAGTAGGAAGCAAGGGGAGCTTAAAGAGAGGCTGAAGCACTCTTACAGTGCCCTGAAAAAAGAATTTAGGCACACTTTTGAGAAATTGAATTCAGATGTTGGAGAATTAAGCGAGGAAGAAAAAAATTTGTTCTATGAGCAGAAAGCTTCGGCCTGGTATCAGGTGACATATCATCCTGAGTGGGTGAAAAAATCCCTTGATCTGCAAGATAAATCCTCAGAGAACCAAGAGGCTGATAGTTTGGGAAGTACGGTGATGTTGAGTTTTCCTTGGATTGCAGTTGATTACCTAGCTCGCACAAAGATAAGGCAACGACATCAGAGATGTGGAAATTTTGACTCAACTAAGCCAGTTGATTCTCTGGCAAAGTATCTATCTGAAAGGTTATAA 3615 0.4064 MDLEGSEKDSVVTQISIGGFGSEVKASDLVNYLEDKIGLVYRCRLKTSWTPPESYPEFNIIDTANIRRTDNYKKVEPHAFVHFASPESVTAALNASGCCDLFLKNQPLKVSCGPENPYFLNQRRRTTTPFKMSDVLVEIGTLVSPGEFFVSWRGPDKGVKFLVDPFDGMCRFCFSRDTAFSFKGIEKKAVIKCDFQVGFLVRDINEIKRYNDTSYLVVLLHLASSPWVWYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRHGAKLMKAMLYLKGQRVQMQELALKQTLRTLNEPDFGVPMSDAFFYIHFQKDIAFDIMFLVNAIVHKGIFNQHRLSDRFFELLKNQPKELNVAALKHLCSYKRPVFDATKRLKIVQEWLLRNPKLYQISKQLDDIVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNSFSQRTKIYKRVKTILEQGFYFCGRKYSFLAFSSNQLRDRSAWFFAEDKIRCDDIRNWMGKFNQRNVAKCAARMGQCFSSTYATVEVAANEVNSMLPDVERNNYIFSDGIGVITHDLAREVAEKLKLDNVPSAYQIRYAGFKGVVASWPAKGDGVRLSLRPSMNKFQSTHNILEICAWTRFQPGFLNRQIITLLSALGVPDEVFWQMQEAMLLKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDESGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLHVVKGFVIIAKNPCLHPGDVRVLEAVDAPDLHHLNDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMEYAPQESKLKTRQVMTRDIIEFFVRNMVNEHLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFVTGDIPYDKDLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWVKKSLDLQDKSSENQEADSLGSTVMLSFPWIAVDYLARTKIRQRHQRCGNFDSTKPVDSLAKYLSERL 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00611 1204 CDD RRM_SF 15 111 - -
Gma06g00611 1204 PANTHER RNA-DEPENDENT RNA POLYMERASE 7 1203 IPR007855 GO:0003968
Gma06g00611 1204 PANTHER RNA-DEPENDENT RNA POLYMERASE 6 7 1203 - -
Gma06g00611 1204 SUPERFAMILY RNA-binding domain, RBD 8 117 IPR035979 GO:0003676
Gma06g00611 1204 Pfam RNA dependent RNA polymerase 420 999 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00611 Gma-Chr6 5536589 5542651 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00611 K11699 - gmx:100795178 2456.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00611 06 5536589 5542651 Gma06g00611 06 5536589 5542651 ECH
Gma04g00624 04 5714456 5718620 Gma06g00611 06 5536589 5542651 ECH
Gma04g00624 04 5714456 5718620 Gma06g00611 06 5536589 5542651 GST