Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00551 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTAATGCTCTTCAAGCTGATGGAAACTCTATCAGGTATGTCTCATCTGAATTGGCTACAGATGTTGCCGTTAATGTTGGTGATATTAAGTTTTACCTTCACAAGTTTCCTCTACTGTCAAAGAGCAACCGACTACAAAAACTGGTATCAAAAGCTAATGAAGAGAATTCTGATGATATTTACTTGGATGATTTCCCTGGAGGACCAAAGACCTTTGAAATATGTGCAAAATTCTGTTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTAGCTGCTCGTTGTGCAGCTGAGTTCCTTGAGATGACTGAGGATGTTGACAGAGGAAACCTGGTTTCAAAGATTGAGGTGTTTCTTAACTCGAGTATCTTTCGTCGCTGGAAGGATTCTATAATTGTTCTCCAAACTTCTAAATCTCTTCTGCCATGGTCCGAGGATCTAAAGATCGTTGGAAGATGCATAGATTCCATAGCTTCTAAAACTAGTGTGGACCCAGCATACATCACTTGGTCTTACACTTGTAATAGGAAATTAACCGAACCTGATAAAATTGTAGAGGACAAGATGACATTTCTAGAGAAAATTGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGACATATGTGAGCTGGACATTGATCTTTACAAACGAGTAATGGTTGCTGTGAGATCAAAGGGGAGAATGGATGGTGTTGTTATTGGGGAGGCACTAAAAACCTACGCATTAAGATGGATACCTGATTCGGTTGATACATTGGTTTCTGATGCCAACACCTCAAGGACCAAATCTGTGGTAGAAACAATTGTCTGTTTACTGCCATATGATAATGGCATCAGTTGTTCGTGTAGTTTCTTGCTGAAGCTATTGAGAGTGGCCATATTAGTCGGAGTAAATGAGTCATCAAGAGAGGAATTGATGAAGAGCATTAGCCTCAAATTGCATGAAGCTTGTGTCAAGGATTTACTGATTCCAGCAAGGTCTCCCCAGACTACCACATATGATGTTCATTTGGTACAAGGTATTTTAAATCATCATATGAATCACGAAAAGGGAATCTGCGGTATGGAGGTTGCTGAGGAGAAACATGGAGGAGAAGATAAATATACTTTAGCACGTAGGTCTTTATTGAATGTTGGCAAGTTGGTGGATGGTTATCTTGGAGAAATTGCACATGATCCTAATCTTGGTCTCTCTAGTTTTGTTGATTTGtcacaatccattccagattttgctagaccagatcatgatggtctgtacagagcaatagacatctacttgaagCAACACTTGAATTTGACAAAAGCTGAAAGGAAGAAGCTATGTGGACTGATGGATGTCCGGAAATTGACAGCAGGTGCTTCTGTACACGCAGCACAGAACGAACGCCTTCCTCTTCGACTTGTAGTGCAGgttctcttctttgatcaggtcagTTTTCATGAATCAACATCATCCTCTTCCCACTGTAAAGCATGGTTAGTGCAATCCATTCCCACCGATATGCCCCACTTATCCCATGTTCCAGGCACCCTCTCTACTGGGGATGTACTTCGGTGGCTGGCTGCAAACTCCACCACGAGGCTTCACATAATTGCTCAGTACTGGCAGCTGTTACCTTCTCCCAACGATCCTCGCTCTGGGGACTATGGTTACACTCAGCATCAGATGCATGAATTTGGTGCCGATCAGGGTGTTTCCCTTTATCAAGCATTAGATGCTGCTGCTGACCGCAATGTTAGCATCAGGTTACTGTCCCACTCTGGAGTGTATCCAACTTTTGCCTCAGAACCATCCAAACTTGCTTTCGGAAGGCCTAATGTTGAGAACGTGACATTGCTACTTGAGGATTGGTGGGGCTCCGGCATTGTCCATGCCAAAGTTTGGATATCTGATAGTAGGGATGTGTATATTGGATCTGCAAACAATGACTGGAAATCTCTTACACAGGTCTACTTTGACAATTTATGGACACTAGCATCTCTTAATTCTTCAGCTTACACAAAAACAGTGTTTGATCAAGACTGGCAAGTTGAGAGAAAGGTTCCTTGCTGGTCGCATTTCATTAATCATAGAGAGAGGTGCAAGTCGCCTCTCCCACAATATCTGGAGACACCTCATATTGCAGGATATCCTATTCTGTCTGAGCCTTATATGTTTAAGGTTCCATTTCAAACTCCTGGGAGTAACTATTCAACAAAGCACCCCCAAGGCAGCTATCTATCATTTGCACCCCCAGAGCTATTATTTGGCAAATATCAGGCTGATGAGCATGCATGGATTGATACAATCAAGTCTGTTGGAAAGAAAGAAACAGTTAGAATCAGTACCATGGACTGGCTAGGTCAGTCAGAATTTATAGACCAAACAATTTACTGGTCATCCTTATCCTCTGCAACATCACAGGTGGTGTTTTCCAAGAATGCAACAGTGCAGATATTGGTAGCATATTGGTCACACTCCATCAGTAACACAGATTCGTACCTGAATTCTCTCCTCTACACCAACAATCTCTGCTCTTCCTCAAAATACAACACATGCTCAGGGAAAGTTGAGATAAAATATTATGTGGTTCCAGGTTTCAACATGACAGGACCTGCCATTAAGGGTGGAAATAGAACAGGTAACATATACCCTGATTTTACCAGAGTGAATCATGGAAAATATGCAGTTAGTGATGTAAGAGCACACATTGGAACTAGCAATCTTGTATGGGACTACTTCTACACAACAGCAGGTGTCAGCCTTGGGACACACAACACTGCCATCATCTCTCAACTTAGGGAAATTTTTAATGCTGATTGGAACTCACCCTATGCTGTTCCATTTGAAGAGATGGAGAACGTTCATACAAGAAGTTCAATCTAA 2895 0.4045 MKFMKLGSKPNALQADGNSIRYVSSELATDVAVNVGDIKFYLHKFPLLSKSNRLQKLVSKANEENSDDIYLDDFPGGPKTFEICAKFCYGMTVTLNAYNVVAARCAAEFLEMTEDVDRGNLVSKIEVFLNSSIFRRWKDSIIVLQTSKSLLPWSEDLKIVGRCIDSIASKTSVDPAYITWSYTCNRKLTEPDKIVEDKMTFLEKIESVPKDWWVEDICELDIDLYKRVMVAVRSKGRMDGVVIGEALKTYALRWIPDSVDTLVSDANTSRTKSVVETIVCLLPYDNGISCSCSFLLKLLRVAILVGVNESSREELMKSISLKLHEACVKDLLIPARSPQTTTYDVHLVQGILNHHMNHEKGICGMEVAEEKHGGEDKYTLARRSLLNVGKLVDGYLGEIAHDPNLGLSSFVDLSQSIPDFARPDHDGLYRAIDIYLKQHLNLTKAERKKLCGLMDVRKLTAGASVHAAQNERLPLRLVVQVLFFDQVSFHESTSSSSHCKAWLVQSIPTDMPHLSHVPGTLSTGDVLRWLAANSTTRLHIIAQYWQLLPSPNDPRSGDYGYTQHQMHEFGADQGVSLYQALDAAADRNVSIRLLSHSGVYPTFASEPSKLAFGRPNVENVTLLLEDWWGSGIVHAKVWISDSRDVYIGSANNDWKSLTQVYFDNLWTLASLNSSAYTKTVFDQDWQVERKVPCWSHFINHRERCKSPLPQYLETPHIAGYPILSEPYMFKVPFQTPGSNYSTKHPQGSYLSFAPPELLFGKYQADEHAWIDTIKSVGKKETVRISTMDWLGQSEFIDQTIYWSSLSSATSQVVFSKNATVQILVAYWSHSISNTDSYLNSLLYTNNLCSSSKYNTCSGKVEIKYYVVPGFNMTGPAIKGGNRTGNIYPDFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTAGVSLGTHNTAIISQLREIFNADWNSPYAVPFEEMENVHTRSSI 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00551 964 SUPERFAMILY POZ domain 22 116 IPR011333 -
Gma06g00551 964 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 890 916 IPR001736 GO:0003824
Gma06g00551 964 SUPERFAMILY Phospholipase D/nuclease 748 959 - -
Gma06g00551 964 Pfam NPH3 family 211 463 IPR027356 -
Gma06g00551 964 Pfam PLD-like domain 575 685 IPR025202 -
Gma06g00551 964 Gene3D Potassium Channel Kv1.1; Chain A 4 129 IPR011333 -
Gma06g00551 964 SUPERFAMILY Phospholipase D/nuclease 527 691 - -
Gma06g00551 964 SMART pld_4 629 656 IPR001736 GO:0003824
Gma06g00551 964 SMART pld_4 890 916 IPR001736 GO:0003824
Gma06g00551 964 CDD BTB_POZ_NPY3-like 21 124 - -
Gma06g00551 964 CDD PLDc_vPLD3_4_5_like_2 749 945 - -
Gma06g00551 964 Gene3D Endonuclease Chain A 478 687 - -
Gma06g00551 964 Gene3D Endonuclease Chain A 753 947 - -
Gma06g00551 964 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 493 IPR029961 GO:0060918|GO:0099402
Gma06g00551 964 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 629 656 IPR001736 GO:0003824
Gma06g00551 964 Pfam BTB/POZ domain 25 114 IPR000210 GO:0005515
Gma06g00551 964 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Gma06g00551 964 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Gma06g00551 964 PANTHER OS12G0117600 PROTEIN 4 493 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00551 Gma-Chr6 4864119 4872939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00551 8 528 EF-hand Containing Proteins AT3G44820 32.240 3.50e-89 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00551 - - gmx:100812575 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00551 06 4864119 4872939 Gma06g00551 06 4864119 4872939 ECH
Gma04g00564 04 5046115 5055340 Gma06g00551 06 4864119 4872939 GST