Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00542 ATGGCGTTGGTGAATCCGTTTCTGTCTCCCCCTCGAACTCCCCTCTCTCTGCGAGTTTCAGCTCCGCCAAACCAAGCACTACTACGTTGGACTCTCTGCTCCCAATATTCATTCAAACCATCATCACTAAGATCGAAGCACGCCATGTGTGGCGCCACTGCCGACATCAAGGCTGCACCTTTAGCTGATGGAGAAGCAGATCACGCGGTTCTTGTGGGCCCCGCCAGCGAGGACGAGAGAAAAGGAGACTATGACTGGACACAGGAATGGTACCCTTTGTATCTCACTCTGAATGTGCCCGAAGATGCACCTTTGGGTCTTAGAGTGTTTGATAAACAGCTCGTCTTGTTCAAAGATGGCAATGGCCAGTTTCGCTGTTACGAAGATCGCTGCCCCCACAGGTTAGCAAAATTATCCGAGGGGCAGTTGATTGATGGAAGGCTTGAGTGTTTGTACCATGGATGGCAATTTGAAGGGGAGGGCAAATGTGTGAAGATACCCCAGCTTCCAGCTGATGCCAAAATCCCTCAGGCAGCTTGTGTTAAAACATATGAAGTGAGGGACTCTCAAGGTGTTATTTGGGTGTGGATGTCCCTCAAGACACCTCCAAATGTTAGTAAACTACCTTGGTTTGAGAACTTCGCAAGGCCGGAGTTTCAAGATATTTCCACAATTCATGAACTCCCTTATGATCACTCTATTCTTCTGGAGAACCTGATGGATCCTGCTCATATCCCAATCTCACATGACAGAACAGATTGGACTGCAAAAAGGGAGGATGCTCAGCCGCTGTGTTTTGAGGTGACCGAACGAACCCATAGAGGGTTTGCAGGTTGGTGGGGCAGAGAGAAAGACGGATCCATGCCTAACTTCTTGCGGTTTGAGGCTCCTTGTGTTCTACAAAACAACAGGGAAATTGTTGATAAGAATGGTGAAATAAACTACTTCAGTGGTCTGTTCCTTTGCAGACCAACCGGGCAAGGGAAATCCATGCTAATAGTGAGATTTGGAGGAACAAAAAGATCACCACTAGCAAAAGTGTTTCCTAAGTGGTACCTCCACCAGAATGCAAGCAAGGTGTTTGAGCAAGACATGGGATTCTTGTCATCACAAAATGAAATTCTTCTGAAAGAAAAGGTTTCAACAAAGGAACTATACCTGAATCTGAAATCATCAGACACATGGGTTGCTGAATACAGGAAGTGGATGGACAAAGCGGGGCATGGAATGCCATATCATTTTGGTCACAGCACTATCTCTTTGCCTAAAGAGCCTGCTGTGGTTGAACATGCTCCTGCGGGACTCGTCGCGGGACAATCAGCTTCTTCACCTACCAAGGGGGGCATTGGTACAATGCATGCCCCAAATTTCGCCAACAGATATTTTAGGCATGTGATTCATTGCAAAGGATGTAGAACCGTTGTCAAAGCTTTCGAAGCTTGGAAAAATGCCCTTTCAGCTGTGGCAGTTGCATTAGTTGCTCTGGCAATTCTGGTATCTGGGAGACAATGGAAAGCCCTTCTCTTGGCATCTGCAGCTCTGTGCTCCGTTGGAGTCTATGCTTGCTCAATCGCCATTGCGATGAATACAACAAATTTTATTAGGACACATAGGAGATTGTGA 1623 0.4689 MALVNPFLSPPRTPLSLRVSAPPNQALLRWTLCSQYSFKPSSLRSKHAMCGATADIKAAPLADGEADHAVLVGPASEDERKGDYDWTQEWYPLYLTLNVPEDAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPQAACVKTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPEFQDISTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEVTERTHRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDKNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPLAKVFPKWYLHQNASKVFEQDMGFLSSQNEILLKEKVSTKELYLNLKSSDTWVAEYRKWMDKAGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANRYFRHVIHCKGCRTVVKAFEAWKNALSAVAVALVALAILVSGRQWKALLLASAALCSVGVYACSIAIAMNTTNFIRTHRRL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00542 540 Gene3D - 217 408 - -
Gma06g00542 540 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 76 540 - -
Gma06g00542 540 Pfam Pheophorbide a oxygenase 294 379 IPR013626 GO:0010277
Gma06g00542 540 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 90 195 IPR017941 GO:0051537
Gma06g00542 540 Pfam Rieske [2Fe-2S] domain 89 171 IPR017941 GO:0051537
Gma06g00542 540 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 76 540 - -
Gma06g00542 540 SUPERFAMILY ISP domain 81 203 IPR036922 GO:0051537
Gma06g00542 540 Gene3D - 85 213 IPR036922 GO:0051537
Gma06g00542 540 SUPERFAMILY Bet v1-like 191 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00542 Gma-Chr6 4806630 4809215 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00542 - - gmx:100818625 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00542 06 4806630 4809215 Gma06g00542 06 4806630 4809215 ECH
Gma04g00553 04 4983206 4985883 Gma06g00542 06 4806630 4809215 GST