Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00553 ATGGAAGTGTTATTATTATGTGGCCAGGAACGACACACGAAACGTGCATTTGTCTCTTTTCCTGTGTTTCTTCCTCGTTTGAGTTTGTGTTTGTGCTATCTTCTTCGCTCTTCACTTTTGTTGTCTAACATGGCTTTGGTGAATCCGTTTCTGTGTACCACTCGAACGTCCCTCCCTCTGCGAGTTTCAGGTCCACCAAACCAAGTCCTACCACGTTGGACTCTCTGCTCCCAATATTCATTCAAAACATCATCACTAAGATCGAAGCAACTCAGGTGTGGCGCCACTGCAGACATCAAAGCAGATCACGCGGTTCTTGTGGGCCCCACCAGCGAGGAGGAGAGAAAAGGGGACTATGACTGGACACAGGAATGGTACCCTTTGTATCTCACTCAGAATGTGCCCGAAGATGCACCTTTGGGTCTCAGAGTGTTTGATAAACAGCTCGTGTTGTTCAAGGATGGCAATGGCCAGTTTCGCTGTTACGAAGATCGCTGCCCCCACAGGTTAGCGAAACTATCTGAGGGACAGTTGATTGATGGAAGGCTCGAGTGTCTATACCATGGATGGCAATTTGAAGGGGAGGGAAAATGTGTGAAGATACCTCAGCTTCCAGCTGATGCCAAAATCCCAAGGGCTGCTTGTGTTAAAACATATGAAGTGAGGGACTCTCAAGGTGTTATTTGGGTATGGATGTCCCTCAAGACACCTCCAAATGTCAGTAAATTACCTTGGTTTGAGAACTTCGCAAGGCCGGGGTTTCAAGATGTTTCGACAATTCACGAACTCCCTTATGATCACTCTATTCTTCTGGAGAACCTGATGGATCCTGCTCATATCCCAATCTCCCATGACAGAACAGATTGGACTGCGAAAAGGGAGGATGCTCAGCCGCTGTGTTTTGAGGTGACCGAACGAACAGATAGAGGGTTTGCAGGTTGGTGGGGCAGAGAGAAAGATGGATCCATGCCTAACTTCTTGCGGTTTGAGGCTCCTTGTGTTCTACAAAACAACAGGGAAATTGTTGATAAGAATGGTGAAATAAACTACTTCAGTGGCCTGTTCCTTTGTAGACCAACCGGGCAAGGGAAATCCATGCTGATAGTTAGGTTTGGAGGAACAAAAAGATCTCCACTAGCAAAAGTGTTTCCTAAGTGGTACTTCCATCAGAATGCAAGCAAGGTGTTTGAGCAAGACATGGGATTCTTGTCATCACAAAATGAAATTCTTCTGAGAGAAAAGGTTCCAACAAAGGAACTATACCTGAATCTGAAATCATCAGACACATGGGTTGCTGAATACAGGAAGTGGATGGACAAAGCGGGGCATGGAATGCCATATCATTTTGGTCACAGCACTATCTCTTTGCCTAAAGAGCCTGCTGTGGTTGAACACGCACCTGCTGGACTAGTCGCAGGACAATCAGCTTCCTCACCAACCAAGGGGGGCATTGGAACAATGCATGCCCCTAATTTTGCCAACAGATATTTTAGGCATGTGATTCATTGCAAAGGATGTAGAACCGTCGTCAAAGCTTTCGAAGCTTGGAAAAATGCTCTTTCAGCTGTGGCAATTGCATTAACTGCGTTGGCAATTCTGCTTTCTGGGAGACAATGGAAGGTCCTTCTCTTGGCATCTGCAGCTCTCTGCTCTGTTGGAGTCTATGCTTGCTCAACCGCCATTGCAATGAATACAACAAATTTTATTAGGACACATAGGAGATTGTGA 1728 0.4601 MEVLLLCGQERHTKRAFVSFPVFLPRLSLCLCYLLRSSLLLSNMALVNPFLCTTRTSLPLRVSGPPNQVLPRWTLCSQYSFKTSSLRSKQLRCGATADIKADHAVLVGPTSEEERKGDYDWTQEWYPLYLTQNVPEDAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRAACVKTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDKNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPLAKVFPKWYFHQNASKVFEQDMGFLSSQNEILLREKVPTKELYLNLKSSDTWVAEYRKWMDKAGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANRYFRHVIHCKGCRTVVKAFEAWKNALSAVAIALTALAILLSGRQWKVLLLASAALCSVGVYACSTAIAMNTTNFIRTHRRL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00553 575 SUPERFAMILY Bet v1-like 226 444 - -
Gma04g00553 575 Gene3D - 252 443 - -
Gma04g00553 575 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 103 575 - -
Gma04g00553 575 Pfam Pheophorbide a oxygenase 329 414 IPR013626 GO:0010277
Gma04g00553 575 Pfam Rieske [2Fe-2S] domain 124 206 IPR017941 GO:0051537
Gma04g00553 575 Gene3D - 120 248 IPR036922 GO:0051537
Gma04g00553 575 SUPERFAMILY ISP domain 115 238 IPR036922 GO:0051537
Gma04g00553 575 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 125 230 IPR017941 GO:0051537
Gma04g00553 575 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 103 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00553 Gma-Chr4 4983206 4985883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00553 - - gmx:100808233 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00553 04 4983206 4985883 Gma04g00553 04 4983206 4985883 ECH
Gma04g00553 04 4983206 4985883 Gma06g00542 06 4806630 4809215 GST