Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00520 ATGAACTTAACCAAGAAAGGACCCCTAACGGATGCAAAGCTATTAAGCCCAAACAAGGCAACTACTCTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTGCCCTCAGATCATCATCATTATCTGGAACTACCAGCTTGGTAGATGCAACAGCAAGGCTTACTGCTGCTGGAACTCTTGGGAAAGCAGTTTTAGATAGATCAGAATCATCCATTTCAAATAATTCTGATGATGAGGTGCACCGATACTGGCGATGTCAGCTCCCGGATGATATTACCCCTGATTTCAAGGTCTTGGGAGAAGATGAGTCTCGAGTTCTTGATGATATTTCTTTAGCAGGTTTATCTATACATGATGACAATGAAGCCTCCAGGTTTCCTTCTTCTAAAGGAAGTAAATATATAATAAATGAGCAGGAGGAAATATCTCAACAGCATGCTAATGGCAATAGCTTGGCAGATAAATTAGGGTTTTCCAATTCAAGCTACAGGGAGGACCCATCTTCTGGAAGCTTTTTGAATGCTCTGGCAAAGCCTTGGGAGAGGCCAATTGGGAGTGCTGACCAGCGTATTAACAGTGGTCAAGAGGGCCTTACTTATGATGACAACTCTAGACATGGATACTTAAATGATATTTTGGCCGAAAATGCAATTGTGGATGATACTGATCTGAATCCTTTGGAGTTTTTAGCCTCCCTGTTCCCTGGTTTTGCAGCAGAAAGCCTTGCAGAAGCTTACTTTGCTAATAGATGTGATTTACATCTGACCACTGAGATGCTCAATCAGTTAGAGCTTCAAGTTGATGGTGGTTTCAATCAGAATCTGAATTCAAAGACTTTGTCTGCTCCCAATCTCAGTGCAATGGACTACCCTGCACTTACTTCACCAGATGGCCAGACTGCTTCAGTAGAATATGTGGTTGATAATGTGCAACAAAGTGGCAATCCTTACCGATCATATGACAGTGATGTGCTGCTTTTCAAATCTGTCTCTTCAGTTTCATCTAGGGGTGGTGCTATTGACTTTGCTTCAGCTGTTAGGAAGTTGGCTTCTCGGGATTCTGGTGGTATTTGGAAGTATGATAAAAATGGCTCTGGTGATGCTGCTATCGGCTCAAGTAGGAATTCGAATGTTCTGGCTAGTGGTTACAATGGTGGACAGGGGAGAGCACACTTTGGTGATCGGTTACAGAACCGTGGTTCAGCTCGGGCATTTCCTGTTTGGCTTGAAACTGGTGATGCAGTTGCAAATATGTATTCAGAGTTGCGGGAAGAGGCTCGTGATCATGCATGCTTACGTAATGCATATTTTGAGCAGGCACAGCAAGCCTATCTTATTGGTAATAAAGCCCTAGCAAAGGAACTAAGTGCTAAAGGGCAACTGCACAACATGCATATGAAGGTTGCTCATGGAAAAGCTCAAGAATCCATTTACCTCCAGAGAAATCCAGTTGCTCCAGAGTTGCAGGGCGATGGAAGAGGAAATGAGAGGATAATAGACCTACACGGGTTGCACGCAAGTGAAGCCATTCATGTGCTGAAACATGAGTTGAGTGTGCTGAAAAGCACTGCCATAGCTGCCGAGCAGCGTCTGCAGGTTTATATTCTTGTGGGCACAGGGGCGGCATCAGATTTACATTTACACTGCACTGACCAGGATTGCCTGCATTATAAAGCCAACTGCAAGGTTCTGCACTCAAATCACAATCTAAAGgatctgtttctggatggtggggtgggatgggaggaagaagataggaataagGCAACATGA 1770 0.4254 MNLTKKGPLTDAKLLSPNKATTLNPNAAEFVPFALRSSSLSGTTSLVDATARLTAAGTLGKAVLDRSESSISNNSDDEVHRYWRCQLPDDITPDFKVLGEDESRVLDDISLAGLSIHDDNEASRFPSSKGSKYIINEQEEISQQHANGNSLADKLGFSNSSYREDPSSGSFLNALAKPWERPIGSADQRINSGQEGLTYDDNSRHGYLNDILAENAIVDDTDLNPLEFLASLFPGFAAESLAEAYFANRCDLHLTTEMLNQLELQVDGGFNQNLNSKTLSAPNLSAMDYPALTSPDGQTASVEYVVDNVQQSGNPYRSYDSDVLLFKSVSSVSSRGGAIDFASAVRKLASRDSGGIWKYDKNGSGDAAIGSSRNSNVLASGYNGGQGRAHFGDRLQNRGSARAFPVWLETGDAVANMYSELREEARDHACLRNAYFEQAQQAYLIGNKALAKELSAKGQLHNMHMKVAHGKAQESIYLQRNPVAPELQGDGRGNERIIDLHGLHASEAIHVLKHELSVLKSTAIAAEQRLQVYILVGTGAASDLHLHCTDQDCLHYKANCKVLHSNHNLKDLFLDGGVGWEEEDRNKAT 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00520 589 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 539 - -
Gma06g00520 589 CDD CUE_CID7_like 223 265 IPR041806 -
Gma06g00520 589 Pfam Domain of unknown function (DUF1771) 418 481 IPR013899 -
Gma06g00520 589 Gene3D - 465 549 IPR036063 -
Gma06g00520 589 SUPERFAMILY SMR domain-like 496 543 IPR036063 -
Gma06g00520 589 SMART DUF1771_2 417 482 IPR013899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00520 Gma-Chr6 4417220 4423234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00520 - - gmx:100814198 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00520 06 4417220 4423234 Gma06g00520 06 4417220 4423234 ECH
Gma04g00529 04 4709404 4712932 Gma06g00520 06 4417220 4423234 GST