Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00529 ATGAACTTATCCAAGAAAGGACCCCTAAGGGATGCAAAGCTATTAAGCCCAAACAAGGCAACAACTCTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTGCCCTCAGATCATCGTCATTATCTGGAACTACCAGCTCGGTAGATGCAACAGCAAAGCTTTCTGCTGCTGGAGCTCTTGGGAAAGCAGTTTTTGATAGATCAGAATCATCCATTTCAAATAATTCTGATGATGAGGTACACCAATACTGGCGATGTCAGCTCCCTGATGATATCACCCCTGATTTCAAGGTCATGGGAGAAGATGAGTCTCGAGTTCTTGATGATCTTTCTTTAGCAGGCTTATCCATACATGATGACAATGAAGCCTCCAGGTTTCCTTCTTCTAAAGGAAGTAAATATATTATAAATGAGCAGGAGGAAATATCTCAACAGCATGTTAATGGCAATAGCTTGGCAGATAAACTAGGGTTTTCCAATTCAAGCTACAGGGAGGACCCATCTTCTGGAAGCTTTTTGAATGTTCTGGCAAAGCCTTGGGAGGGGCCAATTGGGAGTGCTGACCAGTGTATTAGCAGTGGTCAAGAGGGCCTTACTTATGATGACAACTCTATACATGGATACTTAAATGATGTTTTGGTTGAAAATGCAATTGTGGATGATACTGATCTGAATCCTTTGGAGTTTTTAGCTTCCCTGTTCCCTGGTTTTGCAGCAGAAAGCCTTGCGGAAGCTTACTTTGCTAATGGATGTGATTTACATCTGACCACTGAGATGCTCAATCAGTTAGAGCTTCAAGTTGATGGCGGTTTCAATCAGAATCTGAATTCAAAGACTCTGTCAGCTCCCAATCTCAGTGCAATGGACTACCCTGCACTTACTTCACCAGATGGCCAGACTGCTTCAGTAAAATATGTGGTTGATAATGTCCAACAAAGTGGCAATCCTTACCGATCATTTGACAGTGATGTGCTGCTTTTCAAATCTGGCTCTTCAGTTCCATCTGGGGGTGGTGCTATTGAATTTGCTTCAGCTGTTAGGAAGTTGGCTTCTCAGGATTCTGGTGGTATTTGGAAGTATGAAAAAAATGGCTCTGGTGATGCTGCTATCGGCTCAAGTAGGACTTCAAATGTTCTGGCTAGTGATTACAATGGTGGACAGGGGAGAGCACACTTTGTTGATCGGTTACAGAACGTTGGTTCAGCTCGGGCAGCTCCTGTTTGGCTTGAAACCAGTGATGCAGTTGCAAATATGTTTTCAGAGCTGCGGGAAGAGGCTCGCGATCATGCATGCTTACGTAATGCATATTTTGAGCAGGCACAGCAAGCCTATCTAATTGGTGATAAAGCCCTAGCAAAGGAACTAAGTGCTAAAGGGCAACTGCACAACATGCATATGAAGGCTGCTCATGGAAAAGCTCAAGAATCCATTTACCGCCAGAGAAATCCAGTTGCTCCAGAGGTGCAGGGCAATGGAAGAGGAAATGAGAGGATAGTAGACCTACATGGGTTGCACGCAAGTGAAGCCATTCATGTGCTGAAACATGAGTTGAGTGTGCTGAAAAGCACTGCCATAGCTGCCGAGCAGCGTTTGCAGGTTTATATTCTTGTGGGGACAGGTCATCATACCAGGGGTTCTCGCACTCCTGCGAGACTTCCAATAGCTGTACAGCGTTTTCTTCTTGAAGAGGGCATTGACTTCATGGAAACTCAGCCAGGCCTACTACGTGTTGTGATATATTGA 1740 0.4443 MNLSKKGPLRDAKLLSPNKATTLNPNAAEFVPFALRSSSLSGTTSSVDATAKLSAAGALGKAVFDRSESSISNNSDDEVHQYWRCQLPDDITPDFKVMGEDESRVLDDLSLAGLSIHDDNEASRFPSSKGSKYIINEQEEISQQHVNGNSLADKLGFSNSSYREDPSSGSFLNVLAKPWEGPIGSADQCISSGQEGLTYDDNSIHGYLNDVLVENAIVDDTDLNPLEFLASLFPGFAAESLAEAYFANGCDLHLTTEMLNQLELQVDGGFNQNLNSKTLSAPNLSAMDYPALTSPDGQTASVKYVVDNVQQSGNPYRSFDSDVLLFKSGSSVPSGGGAIEFASAVRKLASQDSGGIWKYEKNGSGDAAIGSSRTSNVLASDYNGGQGRAHFVDRLQNVGSARAAPVWLETSDAVANMFSELREEARDHACLRNAYFEQAQQAYLIGDKALAKELSAKGQLHNMHMKAAHGKAQESIYRQRNPVAPEVQGNGRGNERIVDLHGLHASEAIHVLKHELSVLKSTAIAAEQRLQVYILVGTGHHTRGSRTPARLPIAVQRFLLEEGIDFMETQPGLLRVVIY 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00529 579 CDD CUE_CID7_like 223 265 IPR041806 -
Gma04g00529 579 SMART SMR_2 495 579 IPR002625 -
Gma04g00529 579 SUPERFAMILY SMR domain-like 496 577 IPR036063 -
Gma04g00529 579 Pfam Domain of unknown function (DUF1771) 419 481 IPR013899 -
Gma04g00529 579 SMART DUF1771_2 417 482 IPR013899 -
Gma04g00529 579 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 579 - -
Gma04g00529 579 Gene3D - 465 578 IPR036063 -
Gma04g00529 579 ProSiteProfiles Smr domain profile. 498 579 IPR002625 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00529 Gma-Chr4 4709404 4712932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00529 - - gmx:100806301 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00529 04 4709404 4712932 Gma04g00529 04 4709404 4712932 ECH
Gma04g00529 04 4709404 4712932 Gma06g00520 06 4417220 4423234 GST