Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00491 ATGAAGAAGAGTGGCGAAGAAAATGGGGGCAAGTTCAAGCTCAAGGGTGCGGATAGGTCAGCGTACTTCGCACGCAGAGAGGCAGCCAAGGTCTTGAAAGTGGTTCTCGAAGGAGACGCTAAGCGCCGCGCTCTTGCCTCCATCAAATCCCTCATCTATCAACCTTCCGTTAGAAACAAGAAAGCCACATTCGCTCTCATTTGTCAAACCCTAAAACATCTTCCCATTATCAATTATGTCTTGGAAGCTGCTTCTATTCTCAACAGCAAGTGGAAGAGGCAACGAGAATTGATTTATATCATTGTCTATGATATTCTTTTCGGCCAGGCGGTTCCACTAGTTGGTGATGCAGAGAAGTTCCTTATGCGCCACCAAGATGCCCTGCGTTCTACTCTCAAACAGCTTTTGTTGCAGAGAAATGTCAAGACAGTTAAACAGTTGATTGCTCTGCATCAAGTTCCTGATGTTTCTGTACCTCGATATGTTCGTGTGAATACACTTAAACTGGACGTCGATTCTGCCTTGCTTGAACTTCAGAAAAACTACTCGGTTCAAAAGGATCATTTACTGCCTGACTTGCTGATACTCCCACCAGGAACTGATTTACATGATCATCCTCTTGTCAAGAATGGCAGTATCTTTTTGCAAGGTAAGGCAAGTTCCATGGCAGCACCAGCCCTTAGCCCTGAACCAGGATGGGAGGTTCTTGATGCATGTGCAGCACCGGGAAACAAAACTGTTCACCTTGCTGCCCTTATGAAGAGAAAGGGTAAGATTATAGCATGTGAGCTGCAAAGAGAAAGGATTAAGCGTTTGAAAGACACTATAAAGCTATCTGGTGCTTCTAACATACAAGTCCTCAATGATGATTTCTTGAACCAAAATCCCAAGGATCCTTCATATTCCAAGGTGAAAGCTATTCTTTTGGATCCTTCCTGCTCTGGTTCTGGGACTGCTGCTTCAAGACTAGACCATCTGCTCCCATCTAAAGCAGCAGGTCAGGATACTGATACAGAAAGATTGAACAAGCTCGCAACTTTCCAGAGAAAGGCTCTTCAACATGCTTTACTTTTTCCAGCTGTTGAAAGAATTGTATATAGTACATGTTCAATCAACCAAATTGAGAATGAAGATGTCATCAAATCTGTTCTGCCCATAGCCGAATCAAATGGATTTCAATTGGCAAAACCCTTCCCCGAGTGGCAATGCCGTGGTCTACCAGTGTTTGAAGGCTCTGAATGCCTGGTTCGGACAGATCCTGCTAAACACGGCGAGGGTTTCTTCATCGCTTTGTTTACTAGGAAAGATGCTAACTTTTCAGGGGGCTCAAATAAAAATGAAACTAGAATTTCCCACAGCACTCCCGAAATTAAAAACGCGCGAAGAAAGAAGAAACGCGTACCGTTTGTTAGCACTAACCTATTCAAAATGTGGTTATATGATAGTACAATTGTTAAGTCTTGGCGGTCGAATTGA 1476 0.4363 MKKSGEENGGKFKLKGADRSAYFARREAAKVLKVVLEGDAKRRALASIKSLIYQPSVRNKKATFALICQTLKHLPIINYVLEAASILNSKWKRQRELIYIIVYDILFGQAVPLVGDAEKFLMRHQDALRSTLKQLLLQRNVKTVKQLIALHQVPDVSVPRYVRVNTLKLDVDSALLELQKNYSVQKDHLLPDLLILPPGTDLHDHPLVKNGSIFLQGKASSMAAPALSPEPGWEVLDACAAPGNKTVHLAALMKRKGKIIACELQRERIKRLKDTIKLSGASNIQVLNDDFLNQNPKDPSYSKVKAILLDPSCSGSGTAASRLDHLLPSKAAGQDTDTERLNKLATFQRKALQHALLFPAVERIVYSTCSINQIENEDVIKSVLPIAESNGFQLAKPFPEWQCRGLPVFEGSECLVRTDPAKHGEGFFIALFTRKDANFSGGSNKNETRISHSTPEIKNARRKKKRVPFVSTNLFKMWLYDSTIVKSWRSN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00491 491 PRINTS RNA (C5-cytosine) methyltransferase signature 207 221 IPR023267 GO:0001510
Gma06g00491 491 PRINTS RNA (C5-cytosine) methyltransferase signature 236 246 IPR023267 GO:0001510
Gma06g00491 491 PRINTS RNA (C5-cytosine) methyltransferase signature 305 317 IPR023267 GO:0001510
Gma06g00491 491 PRINTS RNA (C5-cytosine) methyltransferase signature 361 377 IPR023267 GO:0001510
Gma06g00491 491 PRINTS RNA (C5-cytosine) methyltransferase signature 417 434 IPR023267 GO:0001510
Gma06g00491 491 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 159 435 IPR029063 -
Gma06g00491 491 Gene3D Vaccinia Virus protein VP39 216 441 IPR029063 -
Gma06g00491 491 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 150 435 IPR001678 GO:0008168
Gma06g00491 491 PANTHER BNAA09G04380D PROTEIN 17 447 - -
Gma06g00491 491 CDD AdoMet_MTases 235 323 - -
Gma06g00491 491 Pfam 16S rRNA methyltransferase RsmB/F 226 432 IPR001678 GO:0008168
Gma06g00491 491 Gene3D Sun protein; domain 3 151 215 - -
Gma06g00491 491 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 17 447 IPR023267 GO:0001510
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00491 Gma-Chr6 4194232 4199226 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00491 K15264 - gmx:100811850 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00491 06 4194232 4199226 Gma06g00491 06 4194232 4199226 ECH
Gma04g00501 04 4482043 4487202 Gma06g00491 06 4194232 4199226 GST