Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00449 ATGCAATGTTCCAAAAAGGAGCAAAACACTCGAGGTTGTATAAATGGCTATTCAGATTGTAGAGCTGGCGTTGCCCGTTACTCCTCCTATCTATCGTGCGTATCTCTTTCTCTCTCCATTTTTATTTATATATTTCTCTCCATTATTTGGTGTGCATGCTCTAGACACACACACACCCCACCACCACCAACACTGAGTTTTAGCAGAAGGATAGAGAGCAGAATGATTCAAAGAACTGTGTCCTTTCCCAGTTTAAGGAAATTGCTTCTTCGGGCTGGTTGTTCTAAATCTGCTTCGTCCAAGATCGGAACTTACAATTGCTTTGCTTCTCAGTCCTCCCCTCTACCGAGCCACAACCCTAGTTACCGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTGATGCCCACTGATTATATGTATATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGTGTCCTAAATTATGGTCAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGACACCAAGAAAAATCTCGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCTCGCGATCATGGCTATCAGGTAGAAGAGCGTGCTGTTGCCGTGGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCAGTAGGGAGTATCACATACCAGGATAAAAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTCGAAGTTGATTAA 1389 0.442 MQCSKKEQNTRGCINGYSDCRAGVARYSSYLSCVSLSLSIFIYIFLSIIWCACSRHTHTPPPPTLSFSRRIESRMIQRTVSFPSLRKLLLRAGCSKSASSKIGTYNCFASQSSPLPSHNPSYRDDEYADVDWDSLGFGLMPTDYMYITKCCEGQNFGQGQLSRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGGLLLFRPEENAIRMKTGAQRMCMASPSIDHFVDALKQTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPAPEYTFLIFASPVRNYFKEGSAPLNLYVEENFDRASSRGTGNVKTISNYAPVLMAQIQAKKRGFSDVLYLDSDTKKNLEEVSSCNIFIAKGKCISTPATNGTILSGITRKSVIEIARDHGYQVEERAVAVDELIEADEVFCTGTAVGVAPVGSITYQDKRMEYITGSGTICQELNNTISGIQTGTIEDKKGWIVEVD 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00449 462 Gene3D - 290 461 IPR043132 -
Gma06g00449 462 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 122 458 IPR036038 GO:0003824
Gma06g00449 462 ProSitePatterns Aminotransferases class-IV signature. 345 374 IPR018300 GO:0003824
Gma06g00449 462 Gene3D - 110 289 IPR043131 -
Gma06g00449 462 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 77 462 - -
Gma06g00449 462 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 158 461 IPR005786 GO:0004084|GO:0009081
Gma06g00449 462 PANTHER AMINO ACID AMINOTRANSFERASE 77 462 IPR005786 GO:0004084|GO:0009081
Gma06g00449 462 CDD BCAT_beta_family 168 449 IPR033939 GO:0004084|GO:0009081
Gma06g00449 462 Pfam Amino-transferase class IV 181 419 IPR001544 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00449 Gma-Chr6 3858185 3865649 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00449 K00826 - gmx:100782644 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00449 06 3858185 3865649 Gma06g00449 06 3858185 3865649 ECH
Gma04g00451 04 4046211 4053938 Gma06g00449 06 3858185 3865649 GST