Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00451 ATGATTCAAAGAATTGTGTACTTTCCCAGTTTAAGGAAATTGCTTCTTCGGGCTGGTTCTAATTCTGCTTCGTCCAAGATCGGAACGAACAATTGCTTTGCTTCTCAGCCCTCCCCTCTTCGGAGTCACAGCAGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTGATGACCACTGATTATATGTACATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGGGTCCTAAATTATGGTCAGGGATTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGATTGGAGCCGAAAGAATGTGCATGGCATCCCCTTCCATTGATAATTTTGTTGATGCTTTGAAGCAAACTGTATTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCAGTTTTGGGTTTGGCTCCTGCACCTCAATACACATTCCTCATATTTGCTTCCCCTGTTCGTAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAGAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGCCACAAAGAAAAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACCAATGGAACTATTCTTTCCGGAATTACTCGAAAAAGTGTCATTGAAATTGCTCGTGATCATGGCTATCAGGTAGAAGAGCGTGTTGTTAACGTGGATGAATTAATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCAGTAGGGAGTATCACATACCAGGATAAAAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGTTGAACAATACGATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTTGAAGTTGATTAA 1155 0.4364 MIQRIVYFPSLRKLLLRAGSNSASSKIGTNNCFASQPSPLRSHSSDDEYADVDWDSLGFGLMTTDYMYITKCCEGQNFGQGQLSRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGGLLLFRPEENAIRMKIGAERMCMASPSIDNFVDALKQTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPAPQYTFLIFASPVRNYFKEGSAPLNLYVEENFDRASSRGTGNVKTISNYAPVLMAQIQAKKRGFSDVLYLDSATKKNLEEVSSCNIFIAKGKCISTPATNGTILSGITRKSVIEIARDHGYQVEERVVNVDELIEADEVFCTGTAVGVAPVGSITYQDKRMEYITGSGTICQELNNTISGIQTGTIEDKKGWIVEVD 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00451 384 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 41 380 IPR036038 GO:0003824
Gma04g00451 384 Gene3D - 212 383 IPR043132 -
Gma04g00451 384 Pfam Amino-transferase class IV 103 341 IPR001544 GO:0003824
Gma04g00451 384 Gene3D - 30 211 IPR043131 -
Gma04g00451 384 CDD BCAT_beta_family 90 371 IPR033939 GO:0004084|GO:0009081
Gma04g00451 384 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 80 383 IPR005786 GO:0004084|GO:0009081
Gma04g00451 384 PANTHER AMINO ACID AMINOTRANSFERASE 15 384 IPR005786 GO:0004084|GO:0009081
Gma04g00451 384 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 15 384 - -
Gma04g00451 384 PIRSF BCAT1 35 384 IPR005786 GO:0004084|GO:0009081
Gma04g00451 384 ProSitePatterns Aminotransferases class-IV signature. 267 296 IPR018300 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00451 Gma-Chr4 4046211 4053938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00451 K00826 - gmx:100818776 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00451 04 4046211 4053938 Gma04g00451 04 4046211 4053938 ECH
Gma04g00451 04 4046211 4053938 Gma06g00449 06 3858185 3865649 GST