LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma06g00446	ATGAACATGCTGTCTAGGAAGGCTAGTCATGACTCTCATGGCCAAGACTCTTCTTACTTTCTAGGGTGGCAAGAGTACGAGAAGAATCCTTACCACCCCATTCAAAATCCAACCGGAATCATTCAGATGGGACTTGCAGAGAATCAGCTTTCATTTGACCTTCTTAAATCATGGCTTCGAAGAAATTCTGACATAGTAGGGATGAAGAAAGATGGAATATCCGTCTTTAGAGAGCTTGCTCTATTTCAAGATTACCATGGGTTACCTGCTTTAAAAAATGAACTGGTGGACTTTATGGCAAAAATAAGAGAAAATGGCATCAAATTTGCTTCGGAGAAGCTCGTTCTCACTGCCGGCGCAACTCCCGCGAATGAGATTCTGATGTTTTGCCTTGCTGATCCTGGGGAAGCTTTCATTCTTCCCACACCCTATTACCCTGGGTTTGATAGAGATCTGAAATGGAGAACCGGGGTTGAGATTGTTCCAATGCATTGCTCCAGCTCAAATGGCTTTAGAATCACTTCCTCTGCTTTAGAACAAGCCTACCAACAAGCACAAAAACTGAATCTCAAAATCAAAGGGGTTTTAGTAACCAACCCCTCAAACCCACTGGGCATAACCATGACCAAAACTGAGCTCAACCACCtagtagatttcgcaattgacaaaaacattcacataataagcgacgaaatctactcgggtactgtcttcgactcacccAAATTCGTAAGCATCACAGAAGTTGTGAACGAGAGAATTACTACTGTCAACAACAATAGCATTACCAGCATTTGGAACCGCATTCACATTGTTTATGGTTTCTCCAAAGACCTTGGCATACCAGGATTTCGTGTGGGAATGATTTTCTCCAACAACGAAACTGTTGTGGCTGCTGCCACCAAAATGTCAAGCTTCGGATTGGTGTCTTCACAAACTCAGTATTTGGTGGCAAACTTGCTTAAGGACAAGAAATTCACTTGCAAGCACATGGAAGAGACTCAGAAGAGACTGAAGAGGCGAAAGGAGATGCTTGTGTCTGGCCTCAGAAACGCGGGGATTAGGTGTTTGAAAAGCAATGCTGGGTTGTTCTGTTGGGTTGACATGAGACACTTATTGGGCTCTGCCACTACTTTTGAGGCAGAGAAGGAGCTTTGGATGAACATTCTTTGCAAAGTTGGGTTGAACATATCTCCTGGCTCTTCTTGCCACTGCTGTGAACCAGGTTGGTTCAGGGTATGCTTTGCCAACATGTCTGAAGACACGTTAGAAGTTGCAATGCGGCGCATAAAGGCTTTTGCGGACTCAATTACCATCTCTACTAGTGTCGTAAGAGGATCCATTGCTAAGTGGGAAAATTAA	1362	0.4141	MNMLSRKASHDSHGQDSSYFLGWQEYEKNPYHPIQNPTGIIQMGLAENQLSFDLLKSWLRRNSDIVGMKKDGISVFRELALFQDYHGLPALKNELVDFMAKIRENGIKFASEKLVLTAGATPANEILMFCLADPGEAFILPTPYYPGFDRDLKWRTGVEIVPMHCSSSNGFRITSSALEQAYQQAQKLNLKIKGVLVTNPSNPLGITMTKTELNHLVDFAIDKNIHIISDEIYSGTVFDSPKFVSITEVVNERITTVNNNSITSIWNRIHIVYGFSKDLGIPGFRVGMIFSNNETVVAAATKMSSFGLVSSQTQYLVANLLKDKKFTCKHMEETQKRLKRRKEMLVSGLRNAGIRCLKSNAGLFCWVDMRHLLGSATTFEAEKELWMNILCKVGLNISPGSSCHCCEPGWFRVCFANMSEDTLEVAMRRIKAFADSITISTSVVRGSIAKWEN	453

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma06g00446	453	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	43	69	-	-
	Gma06g00446	453	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	76	92	-	-
	Gma06g00446	453	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	113	133	-	-
	Gma06g00446	453	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	135	156	-	-
	Gma06g00446	453	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	189	213	-	-
	Gma06g00446	453	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	268	292	-	-
	Gma06g00446	453	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	300	323	-	-
	Gma06g00446	453	PANTHER	1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11	3	441	-	-
	Gma06g00446	453	SUPERFAMILY	PLP-dependent transferases	4	434	IPR015424	-
	Gma06g00446	453	Gene3D	-	63	323	IPR015421	GO:0003824
	Gma06g00446	453	CDD	AAT_like	77	432	-	-
	Gma06g00446	453	PANTHER	BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED	3	441	-	-
	Gma06g00446	453	Gene3D	Aspartate Aminotransferase, domain 1	29	429	IPR015422	GO:0003824
	Gma06g00446	453	ProSitePatterns	Aminotransferases class-I pyridoxal-phosphate attachment site.	274	287	IPR004838	GO:0003824\|GO:0009058\|GO:0030170
	Gma06g00446	453	Pfam	Aminotransferase class I and II	41	430	IPR004839	GO:0009058\|GO:0030170

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma06g00446	Gma-Chr6	3825287	3830627	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma06g00446	K01762		-	gmx:100803507	917.146

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma06g00446	06	3825287	3830627	Gma06g00446	06	3825287	3830627	ECH
	Gma04g00448	04	4004265	4010366	Gma06g00446	06	3825287	3830627	GST