Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00448 ATGAACATGCTGTCTAGGAAGGCTAGTCATGACTCTCATGGCCAAGACTCTTCTTACTTTCTAGGGTGGCAAGAGTACGAGAAGAATTCTTATCACCCCATTCAAAATCCAACCGGAATCATTCAGATGGGACTTGCAGAGAATCAGCTTTCATTTGACCTTCTTAAATCATGGCTTCGAAGAAATTCTGACATAGTGGGGATGAAGAAAGATGGAGTATCCGTCTTTAGAGAGCTTGCTCTATTTCAAGATTACCACGGGTTACCTGCTTTAAAAAATGAACTGGTGGACTTTATGGCAAAAATAAGAGGAAATGGTGTGAAATTTGCTTCAGAGAAGCTGGTTCTCACAGCCGGCGCAACTCCCGCCAATGAGATTCTGATGTTTTGCCTTGCTGATCCTGGGGAGGCTTTCATTCTTCCCACACCCTATTATCCTGGGTTTGATAGAGATCTAAAATGGAGAACTGGGGTTGAGATTGTTCCAATGCATTGCTCCAGCTCAAATGGCTTTAGAATCACTTCCTCTGCTTTAGAACAAGCCTATCAACAAGCACAAAAACTGAATCTCAAAATCAAAGGGGTCTTAGTAACTAACCCCTCAAACCCACTGGGCATAACCATGACCAAAACTGAGCTCAACCACCTAGTAGATTTCGCTATTGACAAGAACATTCACATAATAAGCGACGAAATCTACTCGGGTACGGTCTTCGACTCACCCAAATTCGTAAGCATCACAGAAGTTGTGAACGAGAGAATTACTAGTGTCAGCAACAATAACATTTGGAACCGCATTCACATAGTTTATAGTCTCTCCAAAGACCTTGGCATACCAGGATTTCGTGTGGGAATGATTTACTCCAACAACGAAACGGTTGTAACTGCTGCCACCAAAATGTCAAGCTTCGGATTGGTGTCCTCACAAACTCAGTATTTGGTGGCAAACTTGCTTAAGGACAAGAAATTCACTTGCAAGTACATGGAAGAGACTCAAAAGAGACTGAAGAGGCGCAAGGAGAAGCTTGTGTCTGGCCTGAGAAACGCTGGGATTAGGTGTTTGGAAAGCAATGCTGGGTTGTTCTGTTGGGTTGACCTGAGACACTTGTTAGGCTCTGCCACTTTTGAGGCAGAGAAGGAGCTTTGGATGAAGATTCTTTGCAAAGTTGGTTTAAACATATCTCCTGGCTCTTCTTGCCACTGCTGTGAACCCGGGTGGTTCAGGGTATGCTTTGCCAACATGTCTCAAGACACGTTAGAAGTTGCAATGCGACGCATGAAGGCTTTTGCAGACTCAACCATCTCTACTAGTGTCTTAAGAGGATCCATTGCTAAGTGGGAAAACTAA 1347 0.4373 MNMLSRKASHDSHGQDSSYFLGWQEYEKNSYHPIQNPTGIIQMGLAENQLSFDLLKSWLRRNSDIVGMKKDGVSVFRELALFQDYHGLPALKNELVDFMAKIRGNGVKFASEKLVLTAGATPANEILMFCLADPGEAFILPTPYYPGFDRDLKWRTGVEIVPMHCSSSNGFRITSSALEQAYQQAQKLNLKIKGVLVTNPSNPLGITMTKTELNHLVDFAIDKNIHIISDEIYSGTVFDSPKFVSITEVVNERITSVSNNNIWNRIHIVYSLSKDLGIPGFRVGMIYSNNETVVTAATKMSSFGLVSSQTQYLVANLLKDKKFTCKYMEETQKRLKRRKEKLVSGLRNAGIRCLESNAGLFCWVDLRHLLGSATFEAEKELWMKILCKVGLNISPGSSCHCCEPGWFRVCFANMSQDTLEVAMRRMKAFADSTISTSVLRGSIAKWEN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00448 448 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 271 284 IPR004838 GO:0003824|GO:0009058|GO:0030170
Gma04g00448 448 SUPERFAMILY PLP-dependent transferases 4 430 IPR015424 -
Gma04g00448 448 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11 3 437 - -
Gma04g00448 448 Pfam Aminotransferase class I and II 41 425 IPR004839 GO:0009058|GO:0030170
Gma04g00448 448 CDD AAT_like 77 428 - -
Gma04g00448 448 Gene3D Aspartate Aminotransferase, domain 1 29 425 IPR015422 GO:0003824
Gma04g00448 448 Gene3D - 63 320 IPR015421 GO:0003824
Gma04g00448 448 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 437 - -
Gma04g00448 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 43 69 - -
Gma04g00448 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 76 92 - -
Gma04g00448 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 113 133 - -
Gma04g00448 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 135 156 - -
Gma04g00448 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 189 213 - -
Gma04g00448 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 225 248 - -
Gma04g00448 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 265 289 - -
Gma04g00448 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 297 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00448 Gma-Chr4 4004265 4010366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00448 K01762 - gmx:100803507 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00448 04 4004265 4010366 Gma04g00448 04 4004265 4010366 ECH
Gma04g00448 04 4004265 4010366 Gma06g00446 06 3825287 3830627 GST