Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00410 ATGTCGAATCGATCCAGTCAGGGTAGACACCATGACAACAACAATAACCATAACAAGGGTTTCTCCAAAACCCATAGTCAGAAGAAATTCGCCCCCAAAACTCAAAATCCCAATCCTAACCCCACTCCAACCCTCTCAACCTCCCTCAGACAAACACAATCATCTGTCTCTTCCACCAGTAGCAGAGGCCAGAATGGGAATTTCGTTAAATACTTGCCACAAGACGAGGCCGTGGCAGCGGGTCTCGGCGCCGAAGATGGAGCATTGGATCCCCTCGAATCTCAGAGAGTCGTTGATCTTTTGAACACACACTTGTCACTCTTGCTCAAGTTCAAACCCAAGGAATTCTGGACACAAGTGGCTACTGACACCTCCCTGCATGAGTTTTTGGACAGCTTCTTGCAGTTCAGGAGCAGGTGGTACGATTTCCCTCATCGCGGGGTGAGAGGGATTGTTGCCGGTGTTATTGTTGGAGAGCTCGAGTTGAGTCGCCGCGTTTTCATGGTATTGTATCGAATTTCTTCAAATAAAGACCCCGGTGCTCGACCAGCTGATGCCCTCAGTTTGAGAGACCATGAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGAGTTGCCGAAGTTGTTGGATATATGTGCCATATACTATCATGAAAATGAAGAACTGACAAGATCACTGGTTAGAAATTCTTTGAATGCTCAGCCTTGGATCCATAATAATCTGACTGCAGTAATATCGCATTTTCTAGGAATTGTCAGCAAAATGCATGAACGTTGTAGTTCGTCATTGGAGGTCTTATTTTCTTCTGGAAATCTCGATCACCATAATGCTGCTTTTCTTCAAGCTGATCTGCTGGAGGTAATGGACTTTATAAATGATGCAATTGTATCAATGGACTCTTTTGTTAGTGCATACGAACCAGCAGCTGTTTTCTTCTCTTGCCCAGTTGAAATGAGTTATGGGAATGAGGAACTGCTGAGCCTCCTTGCCCGATTGCATGATTCACTTATTCCATCATTGCAAAAGGGATTCCGTATGATTTTTGCTGACAAACAAGATGGCACAGTATCTAATATCTTAGTAAGTTTGAAGATGTTAAAAATTAGATTGGTAAAGTTTGGTTGGCAACTATTGCACTTGTGCTATCTAAGTGATGAAGTGTTCAGAGATAGCATCCCTCTTCTAGCTGCCACAAAGATGTTTCCTGCCAATGTAGAGGACCCAGTCATCAGAGCTGATATTCTGGTTCAAACATTTAGAGAGATCAATTCAGTATCAGTACATTCTCAGGAAAGCCATCAGAAGGAAACATTTCTTCAAGATGTTGAAAGAAATTTCAATATACTAAGCAGGATTGAGAGATTAAAGGATAGCGGATGGATATTCATTGATGATGAACAGTTTCAATATATATCTGGGATGTTGAGTTCTGTTTATAAGGAGCTGTATTCTGCCACAACCCCTGCGCCAAACCAAACATTGCTGATGGATGAAAATGCTGCAATTACAGAGTCAAACATCAGTCAGATTAGGGACCTGTTCCCTGATTATGGTAAAGATTTTTTAGCTGCGTGTCTTGAGGTCTATGACCAGAAGCCAGAAGAGGTTATTCAAAGAATTTTAGAGGGAACCCTTCATGAAGATCTGCAGAAGCTGGACACCTCGCTAGAGACATTGCCTCCAGCCAAGGCTACCACTGTGGGTGGTAATGATAAAGGAAAAGGTAAATTAATTGATTCTACGTCAGCATCCTCAAATCCAGTTGTTAGGGGGAAACAACAGGCAGAGGGGACAGTGATGTCATCCTCTGCTTCACTAGGAAAATTTGTGAGGAAATCTAGAGCTAACTTGCCTGATCGCAGTATTCTGGATAAAAAGGATGAAAAAGATACATCAAAAACTGCTGCTATGATTTTACAATATGAATATGAAGATGAGTATGACGACTCTTTTGATGACTTGGGTCTAAGTGTAGCAGACTCTGGAGTAGAAGAAAATGAGACATTGAGCGACCAAATAAACGCAAAGTCAGGGAATTCGTGGGCAACAGGGGGTAACTCTGTCAAAAATGCCCCTGATTCAAAATGGGGCTCCAGGAAAAGACCGCAGTACTTTGTAAAGGATGGTAAGAATTACAGCTACAAAGTGGCTGGTGCAGTAGCAGTGGCAAATTCTGATGAAGCTTCGCTAGTAACGCAAGCTCAGAAAGAATTGATACATGGCCTTGGATGTGGAGGCAACCTTCCTCTTGGCGCGGTAAAGAAAGTGATGGATTCCTACAAGGAGGATGATAACCAATCCCAGTCTTCTGAAATGGAAGGGAGAGGGATTTCGGGCAATTCGTTTGGTAGGGGAAGGAAGGAAAGTGGAAAACAAATTGCATCTCATCAGCAGCAGGAGAAACAATCTGATGATTCCGAGGTGGATGGCAATAATCAAAGGGGGAGAGGGAGAGGAAGTGGCAGGGGAAGGGGGGGAGGAGGAGGAAGAAACAATCATTACCAGAAGGACCGAGCCATGAAGAAGCATTTCTCTGGAATGAGTGGTTATTAA 2550 0.4329 MSNRSSQGRHHDNNNNHNKGFSKTHSQKKFAPKTQNPNPNPTPTLSTSLRQTQSSVSSTSSRGQNGNFVKYLPQDEAVAAGLGAEDGALDPLESQRVVDLLNTHLSLLLKFKPKEFWTQVATDTSLHEFLDSFLQFRSRWYDFPHRGVRGIVAGVIVGELELSRRVFMVLYRISSNKDPGARPADALSLRDHEVLLQEKKLLELPKLLDICAIYYHENEELTRSLVRNSLNAQPWIHNNLTAVISHFLGIVSKMHERCSSSLEVLFSSGNLDHHNAAFLQADLLEVMDFINDAIVSMDSFVSAYEPAAVFFSCPVEMSYGNEELLSLLARLHDSLIPSLQKGFRMIFADKQDGTVSNILVSLKMLKIRLVKFGWQLLHLCYLSDEVFRDSIPLLAATKMFPANVEDPVIRADILVQTFREINSVSVHSQESHQKETFLQDVERNFNILSRIERLKDSGWIFIDDEQFQYISGMLSSVYKELYSATTPAPNQTLLMDENAAITESNISQIRDLFPDYGKDFLAACLEVYDQKPEEVIQRILEGTLHEDLQKLDTSLETLPPAKATTVGGNDKGKGKLIDSTSASSNPVVRGKQQAEGTVMSSSASLGKFVRKSRANLPDRSILDKKDEKDTSKTAAMILQYEYEDEYDDSFDDLGLSVADSGVEENETLSDQINAKSGNSWATGGNSVKNAPDSKWGSRKRPQYFVKDGKNYSYKVAGAVAVANSDEASLVTQAQKELIHGLGCGGNLPLGAVKKVMDSYKEDDNQSQSSEMEGRGISGNSFGRGRKESGKQIASHQQQEKQSDDSEVDGNNQRGRGRGSGRGRGGGGGRNNHYQKDRAMKKHFSGMSGY 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00410 849 Gene3D - 502 544 - -
Gma06g00410 849 MobiDBLite consensus disorder prediction 674 699 - -
Gma06g00410 849 SMART cue_7 501 543 IPR003892 GO:0043130
Gma06g00410 849 MobiDBLite consensus disorder prediction 674 692 - -
Gma06g00410 849 MobiDBLite consensus disorder prediction 576 595 - -
Gma06g00410 849 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 15 848 - -
Gma06g00410 849 MobiDBLite consensus disorder prediction 759 849 - -
Gma06g00410 849 MobiDBLite consensus disorder prediction 1 68 - -
Gma06g00410 849 Pfam CUE domain 503 543 IPR003892 GO:0043130
Gma06g00410 849 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 15 848 - -
Gma06g00410 849 MobiDBLite consensus disorder prediction 788 811 - -
Gma06g00410 849 CDD CUE_ASCC2 503 542 IPR041800 -
Gma06g00410 849 ProSiteProfiles CUE domain profile. 501 544 IPR003892 GO:0043130
Gma06g00410 849 MobiDBLite consensus disorder prediction 565 595 - -
Gma06g00410 849 MobiDBLite consensus disorder prediction 19 68 - -
Gma06g00410 849 SUPERFAMILY UBA-like 502 558 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00410 Gma-Chr6 3528946 3536699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00410 K18667 - gmx:100798202 1560.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00410 06 3528946 3536699 Gma06g00410 06 3528946 3536699 ECH
Gma04g00421 04 3651849 3659491 Gma06g00410 06 3528946 3536699 GST