Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00329 ATGAGGGCAGAGTCACAAATTCCCCGAAGCTTAATCCACAGAATCTACGCTCCCTTGGCCAACGAATTTCATTTTGCAGCGCCAATCTCCACCTCCAGAACAAATGAACGCGAACTCGTGCGAGGTATTCTACGAATGCTGCAAGGGTTTTCTGGTCCCCTATTCTTTTGGGATAAAAGTGCTAACAGTTTCCGTGCAAAGAGCGGAGTGTACGTGAGTCATCTCTCACAGAAAAGTCTACACTCTCTTCTCAATCAGTTTATCCACGCAGCCACGTGTCTCCAATTGGTGGCGATTACACTTGATAAAGTCGAAACCGCAATGCCAAAATCTCCTCCTACTTTGAACGCATTTGCGTGCTCTGCTTCAGCGTGCCTCGAGCGGTTGCGTAATATTGCCTTGAAGGAGGAAACGTCCACGAGCAATGCAGATGGTGTAACCACTCCAACCTTGTTAGGATTGGCTAATTCCTTATCGAGTCTTTGCTCAGGTGCTGAGTTCCTATTTCAAGTAGTGCATGAGGCTATTCCTGCTGTATACTTTGAGTTTGGTGTGTCTGTACCGGCTGCAGAACTCGCAGTTCATGTGCTTGACTACCTTCATAAGAAGCTTGACGAAGTGTGTCTTGTACAAGGTGGTGAGGAGGAAGCTTATCAGATGGTGCTTTATATGTATGTTGGGAGCTTGTTGCCATATATTGAGGGTCTTGATTCCTGGCTTTTTGAAGGAATTCTTGATGATCCTTTTGGTGAGATGTTCTTTTTTACTAATAAAGAAGTCTCAGTTGATGAGGCTGAGTTCTGGGAGAAGAGTTATTTGTTGAGAAGGCTGCAGCATAGCAAGTTAGATTCAGAATTCTTCTCTTCCACGAATTATGTCAATGATTCTGTGCCAGCATCAAACGACAAGGAAATGGATAGGAGAGATTCCATCTCTTTGTCTAGTACAGTTAAAGGAAAAGAGCCGAGCATTAGAGACCGTCCAGCCTGTCCCTTTTTTATTAAGGATTTAACTAAATCAATAGTTTCTGCTGGAAAATCTTTGCAGCTGATGCGACATGTACCTGATTGCTCAGTGAATTGTAGCAAAGGAAGCAATTATGAGATTGGAAATACCAAATGTTTAAACTATGGTTTATATCCTTCTCAAAGAATGACTGGGTTAACGTTGCCCGAAGTTTTTTCTGTATCACTAGTTGGACTTGTTGGCCATGGCGACCATGTTTGTAAGTACTTTTGGCAAGACAACTGGTATGAATCTGTATCTGTTTCATCCAATGTATCTCATGTAAATGAGGAAAAAGCAGATAATGACAATACTGAAAAATTAATTGCTCCACCTTACTCAGAAAAGACATGGTATAAGTTCTTGATTGATACATTATTTCAGAAAAGATCAGCTGATTTGAAGCTAAAATACAAAGACATAAATAATGACACAAGAGAGCTGAGAGGGGCTAGAGTTATTGATGACGAAGTGCTCCTCTTGAGGTCATACATAGAAAATCCAGTTATTACTGTATGTCAAAAAAACCTAGGAAAGCATGGGGATGCCCTGAAAACATTGAGTTTATCTCGAAAATTTAGCTTGCCTTCATTAAATGATGAGGGTTTAAGAAAGGCTATATTTGGTGGAGAAAGTGCAGCATTTTCTGATAGTGAAGGAACGAACTATACTTTTGGCTTTCACTTTGGTGAATCTGAATACCTTCGCTCACAGGATGACAGAAAGCTGTTAGAAATGTTGTTTCCTTTTCCCACTATTTTGCCTTCATTTCAGGATGATCTTCCTGTGTCAGAGCTCTTGCCTTTTCAGAGAAACAGCAGTCTTATTTCAAGAGTTCTTCGTTGGATGCAAAATGTTGACCTAAGAATTACTCCACTTCCTCTGGTTATTATGCAGTACTGCCTAACCGTCTACATTCAGAAACAGGTGGATTATATTGGAGTGAATATGTTGTTAAAGTTGATGAACGAATGGAGATTCATGGATGAGCTTGCAGTGTTGCGAGCTATATACTTGCTAGGTTCAGGTGATTTGCTGCAACACTTTTTGACTGTAATTTTCAATAAGTTGGATAAGGGTGAAGCATGGGATGATGATTTTGAGTTAAACACCATATTACAGGAATCAATCAGAAATTCTGCTGATTGTATGCTGTTAAGTGCTCCAGATTCATTGGTAGTGTCAATAACCAAAAATCGTGTTGACGGTGATGAGGAAGCTAGCACAGCTGGTGTTTTGAGTACTCCTCGTCAAAGTCATGCCAATAGCTTTGGAATTAATGGCCTTGATATGCTCAAATTCACGTATAAGGTCCCTTGGCCTCTTGAACTCATTGCAAATACAGAGGCAATTAAGAAGTACAACCAGGTGATGCGGTTCTTGTTGAAGGTCAAGCGTGCAAAATTTGTATTAGATAAAGTGCGGAGATGGATGTGGAAGGGTAAGGGATCTGCTACAAACAACAGAAAGCATCATTGGTTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTTATGGATCGGGTATATCACAGCGCATGGCGTGAACTATGTGAAGGTATGACTGCAGCAAAGTCTCTGGATGAAGTCATCGAAGTCCATGAGGCTTACATCTTATCAATTCAGCGGCAATGCTTTGTGGTTCCTGATAAGCTGGGGGCTCTTATTGCCAGCCGCATCAACAGCATCCTTGGCATAGCTTTAGATTTTTATAACATACAACAGACATTAGGTAGTGGTGGAGCTGTTTCTGCAATCAAAGCAAGGTGTGAGATGGAAGTGGACCGGATAGAGAAACAGTTTGACGATTGCATTGCTTTCTTACTAAGGGTTTTATCATTCAAACTAAACGTGGGGCACTTCCCTCATTTGGCTGATTTGGTGACCAGAATCAACTACAACTATTTCTACATGTCTGCTAATGGAAATTTGATGACTGCCTCCAGTTCTGGAAGTGTTACTTCAAGGTTGGGGAAGGCCCCTGGGTAG 3009 0.4134 MRAESQIPRSLIHRIYAPLANEFHFAAPISTSRTNERELVRGILRMLQGFSGPLFFWDKSANSFRAKSGVYVSHLSQKSLHSLLNQFIHAATCLQLVAITLDKVETAMPKSPPTLNAFACSASACLERLRNIALKEETSTSNADGVTTPTLLGLANSLSSLCSGAEFLFQVVHEAIPAVYFEFGVSVPAAELAVHVLDYLHKKLDEVCLVQGGEEEAYQMVLYMYVGSLLPYIEGLDSWLFEGILDDPFGEMFFFTNKEVSVDEAEFWEKSYLLRRLQHSKLDSEFFSSTNYVNDSVPASNDKEMDRRDSISLSSTVKGKEPSIRDRPACPFFIKDLTKSIVSAGKSLQLMRHVPDCSVNCSKGSNYEIGNTKCLNYGLYPSQRMTGLTLPEVFSVSLVGLVGHGDHVCKYFWQDNWYESVSVSSNVSHVNEEKADNDNTEKLIAPPYSEKTWYKFLIDTLFQKRSADLKLKYKDINNDTRELRGARVIDDEVLLLRSYIENPVITVCQKNLGKHGDALKTLSLSRKFSLPSLNDEGLRKAIFGGESAAFSDSEGTNYTFGFHFGESEYLRSQDDRKLLEMLFPFPTILPSFQDDLPVSELLPFQRNSSLISRVLRWMQNVDLRITPLPLVIMQYCLTVYIQKQVDYIGVNMLLKLMNEWRFMDELAVLRAIYLLGSGDLLQHFLTVIFNKLDKGEAWDDDFELNTILQESIRNSADCMLLSAPDSLVVSITKNRVDGDEEASTAGVLSTPRQSHANSFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKGKGSATNNRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMTAAKSLDEVIEVHEAYILSIQRQCFVVPDKLGALIASRINSILGIALDFYNIQQTLGSGGAVSAIKARCEMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSANGNLMTASSSGSVTSRLGKAPG 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00329 1002 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 4 998 - -
Gma06g00329 1002 Gene3D - 662 976 IPR042241 -
Gma06g00329 1002 Pfam Gamma tubulin complex component N-terminal 40 372 IPR041470 -
Gma06g00329 1002 Pfam Gamma tubulin complex component C-terminal 663 977 IPR040457 GO:0043015
Gma06g00329 1002 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 4 998 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00329 Gma-Chr6 2852464 2861559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00329 27 709 Glycosyltransferase AT1G20570 50.358 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00329 K16572 - gmx:100782299 1988.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00329 06 2852464 2861559 Gma06g00329 06 2852464 2861559 ECH
Gma04g00342 04 2923660 2930454 Gma06g00329 06 2852464 2861559 GST