Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00238 ATGGGAGCTCTCGCTTCATTCGCCCCTTGGATTTCCGAGGACGACCTTCTTCTCAAGAACTCCGTTGAGGCTGGTGCTTCATTAGAATCGCTTGCGAAAGGTGCAGTGCAGTTTTCTCGAAAATATAGTATTAAAGAGATACAGGATCGATGGTATTCTCTCCTCTATGATCCTGTCATTTCTGCAGAAGCTGCGGCGAATATGACAAACTTAGAGCTTTCAGCTTTGCCTCTCCCATCAAAGTTCTATAGGTTTGGACATTCCAAAGAACGGAAAGTTGTTTCTGCTACAAGAAAGTCTGACAGTGTTCGCAATTTGTATTATGCTAGGCGCAAAAGAATCCGCAATAGCATGTTAACTTCCATGGACTTAAGTTTTCTAGTTGATTCAGAAAATGGTAATTATGCAGCGCATGGAAGTGATCCTTTATCTGGAAACTGCATGCCTGAAGGTGGAACTTCAAATCATTTTTCAAGTCTTGATCCTTCTCAGTATGCTTTTCCTGAAAATGTGATGGATGATAATGTTGCTTCTGATAGAGTTGCTGCTGGTGTGTTTTGCCATGGAGTTGACAAGGCAGTTGCAGAGAATTTCCCTGCCAAGCTAAAGAGTGTACTTAAGGAAGAACCTCAGATTTTTGAAGGCAATATGCCTTTGGATGGAGTTGTTGAGGATTTGGATGTTCCTAATGAATTGGCTATAGATGGGTGGATTGGAGATGATGGTTTAGAGAGAATGCCTTTGTCCGCATTGAATCATATCAACAATGACCCTGGAAATATGTGTCCTGAGTTTGATGAAAACAATGTATTTGATTCAGAGTTAGAGTGTGGAACATCATTTAACTTATCTTCTCGTCCTGAAATGTCAGTCTGGGGAACAGATGAGAGCATTCAAGAACATGATTTGCCATGTGATGGTTTTAGTGATCCTATTGCTTGTGGGGATGCTTATTTGGAAGAACTGTCCAATTCTCTCCTCCACTTCAGTAGTGAGGAAGAACAAATTCTGATGGATGTTGATGGAGAAGAAGGGATTGAAAAATCTTACTTTGGTGGCCTGACTTCACTCCTACAAAATTCTACAAATGATGTTAATTCAGATCAGATTTCTGAAAAGGATGAAACAGAGTCACTAATGGCCTCACAGGCACATGTTATAAATCAGTCAGTTTCATGTCACAAAGAATTGGATGACAACCTAGGGTCAAGCTCTAGTGGTTTACAAGTAGTTCCCAAATTAGAGTTCCAAATGTCATCTTCTGTCGCGGCTACAGACCCCCAATTTCCTGATCTAATTAATGAAAGTATGTCCTGTTCAATAAACACCGAGCACCAAGAAATTCCAGAAAATGATGACGTTTTTCTACCATTTGATGTGCCTCCTGTCATATTTCCCCCTTCATCAAAATTAATTTTTAAAGTATCCAATAAACCAATTTCTTCATCTGTTATTAAGCATAGAGATAGTGAAAGAGGTAAAACTTTGATGCATGTAGAAAAGAAAGACTCTGTAGAATCTCATGCATCTTTTCAGATGATGGAATCTCCTTGCTTCCCAGGACCTGTTGGTGGTTCTAAGGTAGAATGTGAGTTGCCTGCTAATCATGCACCACACACAGTGTCTAGGAGTTCTGTTACTGTTTCTGGTGGCTTAGGTGGAAATGAAGCTGCAAACACAACAGATGCTTTTTTGCATGCTAATAAAAAGGAAGAAGCTACCAACGTTGGCTTGGCAAAGGATCCAAACAATCATGTGGCAAATTCTTTCATGAAGAAATCAGCTGTTGATTCTAAAGACTTCAGAAATCATCCCCAACCTAATGGTTTTAGCATGAAGACTGAACAAGATTTAGCCTTGCCACTTCAAGATTACCAGTTGCAACGTGCTGAACTGGGATCCTCAGATGTTCTTGAGTCAGAGCTGGTAGCAAATCCTCCAACATTAGATGAGGAAGAGCAATATATAGAGAGTGATGAGGAGCTTCCTTCTTATTCTGACGTAGAGGCAATGTTACTTGATATGGACCTGGATCCTGATGATCACCAGGATtcgtattataatgaggaagtatcaagatatcaacatgtggaaagtaagcgagctatcatgaggctggaactaggtgcccattcttgtattcaaagagccattgattcacatggagcatttgccattttgtacagtcgccactcaaagcattatattaagaaacctgaggttttacttggacgagcaacagaaggtgttcctgtagacattgatttgggcaaaggagggcatggcaatgcaatatctcgacgtcagGCAATTATAAAGATGGATAAAGATGGTTCATTCTACATCAAAAACCTTGGCAAGAGTCCAATCCTGGTAAATAACAAAGAAGTGCACACTGGTCAGTCTCAAAGACTGCATTCTGATTGTCTGATTGAGGTGAGAGGCATGCCATTGATATTTGAGATAAATCAAAGTCGTGTGAAGCAGTACGTGGATCACATTTCTGACAATTCACAGAACTTTTAG 2526 0.3614 MGALASFAPWISEDDLLLKNSVEAGASLESLAKGAVQFSRKYSIKEIQDRWYSLLYDPVISAEAAANMTNLELSALPLPSKFYRFGHSKERKVVSATRKSDSVRNLYYARRKRIRNSMLTSMDLSFLVDSENGNYAAHGSDPLSGNCMPEGGTSNHFSSLDPSQYAFPENVMDDNVASDRVAAGVFCHGVDKAVAENFPAKLKSVLKEEPQIFEGNMPLDGVVEDLDVPNELAIDGWIGDDGLERMPLSALNHINNDPGNMCPEFDENNVFDSELECGTSFNLSSRPEMSVWGTDESIQEHDLPCDGFSDPIACGDAYLEELSNSLLHFSSEEEQILMDVDGEEGIEKSYFGGLTSLLQNSTNDVNSDQISEKDETESLMASQAHVINQSVSCHKELDDNLGSSSSGLQVVPKLEFQMSSSVAATDPQFPDLINESMSCSINTEHQEIPENDDVFLPFDVPPVIFPPSSKLIFKVSNKPISSSVIKHRDSERGKTLMHVEKKDSVESHASFQMMESPCFPGPVGGSKVECELPANHAPHTVSRSSVTVSGGLGGNEAANTTDAFLHANKKEEATNVGLAKDPNNHVANSFMKKSAVDSKDFRNHPQPNGFSMKTEQDLALPLQDYQLQRAELGSSDVLESELVANPPTLDEEEQYIESDEELPSYSDVEAMLLDMDLDPDDHQDSYYNEEVSRYQHVESKRAIMRLELGAHSCIQRAIDSHGAFAILYSRHSKHYIKKPEVLLGRATEGVPVDIDLGKGGHGNAISRRQAIIKMDKDGSFYIKNLGKSPILVNNKEVHTGQSQRLHSDCLIEVRGMPLIFEINQSRVKQYVDHISDNSQNF 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00238 841 Gene3D - 687 834 - -
Gma06g00238 841 PANTHER MICROSPHERULE PROTEIN 1 1 839 IPR037912 GO:0002151|GO:0031011|GO:0071339
Gma06g00238 841 PANTHER FHA DOMAIN PROTEIN 1 839 - -
Gma06g00238 841 Pfam N-terminal region of micro-spherule protein 10 75 IPR025999 -
Gma06g00238 841 CDD FHA 737 823 IPR000253 GO:0005515
Gma06g00238 841 Pfam FHA domain 742 812 IPR000253 GO:0005515
Gma06g00238 841 ProSiteProfiles Forkhead-associated (FHA) domain profile. 741 797 IPR000253 GO:0005515
Gma06g00238 841 SUPERFAMILY SMAD/FHA domain 722 824 IPR008984 GO:0005515
Gma06g00238 841 SMART FHA_2 740 797 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00238 Gma-Chr6 2133305 2139152 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00238 - - gmx:100803683 1664.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00238 06 2133305 2139152 Gma06g00238 06 2133305 2139152 ECH
Gma04g00257 04 2232610 2237987 Gma06g00238 06 2133305 2139152 GST