Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00257 ATGGGAGCTCTCACTTCATTCGCCTCTTGGATTCCCGAGGACGATCTTCTTCTCAAGAACGCCGTTGAGGCTGGTGCTTCACTAGAATCGCTTGCGAAAGGTGCAGTGCAGTTTTCTCGAAAATATAGTCTTAAAGAGATACAGGATCGGTGGTATTCTCTCCTCTATGATCCTGTCATTTCTGCTGAAGCCGCGGCCGGTATGACAAACTTTGAGCTTTCGGCTTCGCCTCTCCCATCAAAGTTCTATAGGTTTGGACACTTGAAAGAACGGAAAGTTGTTTCTGCTACAAGAAAGTCCGAGAGTGTTCGCAATTTGTATTATGCCAGGTGCAAAAGAATCCGCAATAGCATGTTAACTTCCATGGACTTAAGTTTTCTAGTTGATTCGGAAAATGGTAACTATGCAGTGCATGGGAGTGATCCTTTATCTGGAAACTGCATGCCTGAAGGTGGAACTTCTAATCATTTTTCAAGTCTTGATCCTGCTCAGTATGCTTTTCCTGAAAATTTGATGGATGATAATGTTGCTTCTGATAGAGTTGCTGCTGGTGTGTTTTGCCATGGAGTTGACAATGCAGTTGAAGAGAATTTCCCTGTCGAGCTAAAGAGTGTACTTAAGGAAGAACCTCAGATTTTTGAAGACAATGTGCCTTTGGATGGAGTTGTTGAGGATTTGGATGTTCCTAATGAATTGGCTATAGATGGGTGGATTGGAGACGATGGTTTAGAGAGAATGCCTTTGTCCACATTGGATCATATCAACAATGACCCTGGAAATATGTGTCCTGAGTTTGATGAAAACAATGTATTTGATTCAGAGTTAGAGTGTGGAACATCATTTAACTTATCTTCACTTCATGAAATGCCAGTCTGGAGGACAGATGAGAGCATTCAAGAACACGATTTGCCATGTGATGGTTTTAATGATCCTATTGCTTGTGGGGATGCTTATTTGGAAGAACTGTCCAATTCTCTCCTCCACTTCAGTAGCGAGGAAGAACAGATTCTGATGGATGTTGATGGAGATGAAGGGATTGACAAGTCTTACTTTGATGGTCTGACTTCACTACTACAAAATTCTACAAATGATATTAATTCAGATCAGATCTCTAAAAAGGATGAAACAGAGTCGTTAATGGCCTCACAGGCACATGTTATAAATCAGTCAGTTTCATGTCACAAAGAATTGGATGACAACTCGGGGTCAAGCTCTCGTGGTTTACAAGTAGTTCACAAATTAGAGTTCCAAATGTCATCTTCTGTCTCGACTACAGACCCCCAATTTCCTGAACTAATTAATGAAAGTATGCCCTGTTCAATAAACACCGAGCACCAAGAAATTCCAGAAAATGATGACGTTTTTCTACCATTTGATGTGCCTCCTGTCATATTTCCCCCTTCATCTAAATTAATTTTCAAAGTATCCAATAAACCAATTTCTTCATCTGTTATTAAGCATAGAGCTAGTGAAAGAGGTAAAACTTTGATGCATGTAGAAAAGAAAAACCCTGCAGCACCTCATGTATCTTTTCAGATGATGGAATCTCCTTGCTTCCCAGGACCTGTTGGTGGTTCTAAGGTAAAATGTGAGTTGCCTGCTAATCATGCAGCACACACAGTGTCTAGGAGTTCTGTTATTGTTTCTGGTGGCTTAGGTGGAAATGATGCTGCAAACACAACAGATGCTCTTTTGCATGCAAATAAAAAGGAAGAAGCTACCAGCATTTGCTTGGCAAAGGATCCAAGCAATCATGTGGCAAATTCCTTCATGAAGAAATCAGCTGCTGATTCTAAAGACTTCAGAAATCATCCCCAACCTAATGGTTCTAGCATGAAAAATGAACAAGATTTACCCTTGCCACTTCAAGATCACCAGTTGCAACGTGCTGAACTGGGATCCTCAGATGTTCTTGAGTCAGAGCTGGTGGCAAATCCTCCAGCATTAGATGAGGAAGAGCAATATATAGAGAGTGACGATGAGCTTCCTTCTTATTCTGACGTAGAGGCAATGGTACTTGATATGGACCTGGATCCTCATGATCACCAGGATtcttattataatgaggaagtatcaagatatcaacatgtggaaagtaagagagctatcatgaggctggaacaaggttcccattcttgtattcaaagagccattgattcacatggagcatttgccattttgtacagtcgccactcaaagcattatattaagaaacccgaggttttacttggacgagcaactgaaagtgttcctgtggacattgacttgggcaaaggagggcatggcaatgcaatatctcgacgtcagGCAATTATAAAGATGGCTAAAGATGGCACATTCTACATCAAAAACTTTGGCAAGAGTTCAATCCTTGTAAATAGCAAAGAAGTGCACACTGGTCAGTCTCAAAGACTGCATTCCAATTGTCTGGTTGAGGTGAGGGGCATGCCTTTGATATTTGAGTTAAATCAAAGTCGTGTGAAGCAGTACCTGGATTACATTTCTGACCATTCTCAGACCTTTTAG 2526 0.369 MGALTSFASWIPEDDLLLKNAVEAGASLESLAKGAVQFSRKYSLKEIQDRWYSLLYDPVISAEAAAGMTNFELSASPLPSKFYRFGHLKERKVVSATRKSESVRNLYYARCKRIRNSMLTSMDLSFLVDSENGNYAVHGSDPLSGNCMPEGGTSNHFSSLDPAQYAFPENLMDDNVASDRVAAGVFCHGVDNAVEENFPVELKSVLKEEPQIFEDNVPLDGVVEDLDVPNELAIDGWIGDDGLERMPLSTLDHINNDPGNMCPEFDENNVFDSELECGTSFNLSSLHEMPVWRTDESIQEHDLPCDGFNDPIACGDAYLEELSNSLLHFSSEEEQILMDVDGDEGIDKSYFDGLTSLLQNSTNDINSDQISKKDETESLMASQAHVINQSVSCHKELDDNSGSSSRGLQVVHKLEFQMSSSVSTTDPQFPELINESMPCSINTEHQEIPENDDVFLPFDVPPVIFPPSSKLIFKVSNKPISSSVIKHRASERGKTLMHVEKKNPAAPHVSFQMMESPCFPGPVGGSKVKCELPANHAAHTVSRSSVIVSGGLGGNDAANTTDALLHANKKEEATSICLAKDPSNHVANSFMKKSAADSKDFRNHPQPNGSSMKNEQDLPLPLQDHQLQRAELGSSDVLESELVANPPALDEEEQYIESDDELPSYSDVEAMVLDMDLDPHDHQDSYYNEEVSRYQHVESKRAIMRLEQGSHSCIQRAIDSHGAFAILYSRHSKHYIKKPEVLLGRATESVPVDIDLGKGGHGNAISRRQAIIKMAKDGTFYIKNFGKSSILVNSKEVHTGQSQRLHSNCLVEVRGMPLIFELNQSRVKQYLDYISDHSQTF 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00257 841 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Gma04g00257 841 PANTHER FHA DOMAIN PROTEIN 1 837 - -
Gma04g00257 841 MobiDBLite consensus disorder prediction 601 616 - -
Gma04g00257 841 CDD FHA 737 823 IPR000253 GO:0005515
Gma04g00257 841 ProSiteProfiles Forkhead-associated (FHA) domain profile. 741 797 IPR000253 GO:0005515
Gma04g00257 841 PANTHER MICROSPHERULE PROTEIN 1 1 837 IPR037912 GO:0002151|GO:0031011|GO:0071339
Gma04g00257 841 Pfam FHA domain 742 812 IPR000253 GO:0005515
Gma04g00257 841 SUPERFAMILY SMAD/FHA domain 722 823 IPR008984 GO:0005515
Gma04g00257 841 Gene3D - 681 831 - -
Gma04g00257 841 SMART FHA_2 740 797 IPR000253 GO:0005515
Gma04g00257 841 MobiDBLite consensus disorder prediction 594 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00257 Gma-Chr4 2232610 2237987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00257 - - gmx:100786493 1679.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00257 04 2232610 2237987 Gma04g00257 04 2232610 2237987 ECH
Gma04g00257 04 2232610 2237987 Gma06g00238 06 2133305 2139152 GST