Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00186 ATGTTGCCGCGTTGCCGCATCCCGAGCATTCCAATTTCAATTCCAAACCGCACCTTCTCCTTCAGTTTTCTCTCTGCTACGAGCTATAAATTTATTTCTGCCACCGCGAGCGCCGCTTCTGGCTCCGCCGGCGACACAGACTCCGATGGAGAGCCAAAATTGAACTTCTCCGGTGTGCGGTTGGAGGAGGCCGTCGATAGCAGAATCGGATCTGGAAAACTCAGACTCGACAACTGGATCTCTTCCCGCATCAATGGCATTCGTAGGGCAAGAGTTCAATCAAGTATCAAATCAGGACTCGTTCATGTCAATGGCCGTGTGGTTGATAAGGTTTCTTTCAATGTCAAATCTGGGGATGAGATCAAGTGCACAATCGCAGAATTGCAGAATTGCAGAATTTGA 402 0.49 MLPRCRIPSIPISIPNRTFSFSFLSATSYKFISATASAASGSAGDTDSDGEPKLNFSGVRLEEAVDSRIGSGKLRLDNWISSRINGIRRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQNCRI 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00186 133 ProSiteProfiles S4 RNA-binding domain profile. 74 122 - -
Gma06g00186 133 SUPERFAMILY Alpha-L RNA-binding motif 74 125 - -
Gma06g00186 133 Gene3D - 59 130 IPR036986 GO:0003723
Gma06g00186 133 Pfam S4 domain 75 121 IPR002942 GO:0003723
Gma06g00186 133 SMART s4_6 74 129 IPR002942 GO:0003723
Gma06g00186 133 CDD S4 75 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00186 Gma-Chr6 1622145 1623687 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00186 K06180 - gmx:100810383 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00186 06 1622145 1623687 Gma06g00186 06 1622145 1623687 ECH
Gma04g00197 04 1677992 1682746 Gma06g00186 06 1622145 1623687 GST