Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00163 ATGCAAGCTGCGTCTTCAGGCATCGGATACGGTCTAAAATATCAGGCTAGGTGCATATCGGATGTTAAAGCAGACACAGATCACACTAGCTTCCTCGCTGGCACTCTCAGCCTCAAAGAAGAAAATGAGGTACATCTGATTCGGCTTTCGTCGAGTGGAACTGAACTCTTCTGCGAGGGATTGTTCTCTCACCCCAACGAGATCTGGGACCTTGTCTCTTGTCCCTTTGATCAACGGATCTTTTCAACCGTCTACTCTAACGGTGAAACGTATGGGGCAGCAATATGGCAGATCCCCGAGCTATATGGCGAGTTAAATTCACCTCAGCTAGAGAGAATTACCTCACTTGACACAGATTCTGGCAAGATTAAATGTATTCTATGGTGGCCATCTGGAAGACATGATAAATTGATCAGCATCAATGAGGAAAACCTGTACTTGTGGAATTTAGACGTTTCAAAGAAAATTGCACTGGTACAATCGCAAGATTCCGCTGGTATGCTGCACAAGTTATCTGGAGGGGCATGGAACCCACATGATGTGAGTTCTGTTGCTGCAACTTGTGAATCGTATCTCCAATTTTGGGATGTCAGAACAATGAAGAAGACTATGTCAATCGAGTGTTCCCATGTATGCAGTGTTGATTACCATCCCCAAAAGCAGCACATGCTTGTTACTGCAGAACATGAGTCTGGGATACATATTTGGGATCTAAGAAAACCTAAAGTTCCCATCCAAGAGCTTCCAGGACATACTCATTGGACTTGGACTGTCAAGTGTAACCCAGAGTATGATGGAATGAtcttgAGTGCTGGTACGGATTCAACTGTCAACTTGTGGCTTGCCTCAATAAATCATGATGAGTTAACAACTGAAAGCAGACAAGCCAATTCATCTGCCCGATGGGTTGATCCATTGCTTAATACGTACAGTGATTATGAAGACAGCATTTATGGGCTCACATGGAGTTCTTGTGAACCATGGATCTTTGCATCATTATCCTATGATGGCAGGGTTGTTGTTGAATCAGTGAAGCCTTTCATCTCCAAAAAATAA 1056 0.4347 MQAASSGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSSSGTELFCEGLFSHPNEIWDLVSCPFDQRIFSTVYSNGETYGAAIWQIPELYGELNSPQLERITSLDTDSGKIKCILWWPSGRHDKLISINEENLYLWNLDVSKKIALVQSQDSAGMLHKLSGGAWNPHDVSSVAATCESYLQFWDVRTMKKTMSIECSHVCSVDYHPQKQHMLVTAEHESGIHIWDLRKPKVPIQELPGHTHWTWTVKCNPEYDGMILSAGTDSTVNLWLASINHDELTTESRQANSSARWVDPLLNTYSDYEDSIYGLTWSSCEPWIFASLSYDGRVVVESVKPFISKK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00163 351 PANTHER WD REPEAT-CONTAINING PROTEIN DWA2 1 350 - -
Gma06g00163 351 PANTHER WD-REPEAT PROTEIN 1 350 IPR040323 -
Gma06g00163 351 SUPERFAMILY WD40 repeat-like 18 341 IPR036322 GO:0005515
Gma06g00163 351 Gene3D - 14 350 IPR015943 GO:0005515
Gma06g00163 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 248 280 IPR001680 GO:0005515
Gma06g00163 351 SMART WD40_4 55 97 IPR001680 GO:0005515
Gma06g00163 351 SMART WD40_4 109 149 IPR001680 GO:0005515
Gma06g00163 351 SMART WD40_4 199 237 IPR001680 GO:0005515
Gma06g00163 351 SMART WD40_4 303 343 IPR001680 GO:0005515
Gma06g00163 351 SMART WD40_4 241 281 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00163 Gma-Chr6 1445088 1449775 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00163 K23289 - gmx:100791684 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00163 06 1445088 1449775 Gma06g00163 06 1445088 1449775 ECH
Gma04g00172 04 1474814 1480456 Gma06g00163 06 1445088 1449775 GST