Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00133 ATGAGCTTCATTCTGTTTCCGATTCTCTTTGCATTTACCTTTCTGTCCTCGCCCGTTCTCTCTGCTTCGGATCTGGTCCTCGCCAAGGTTGACCGTCGCATTGATCTGACTTCACAGATTGTGCGCATCACTACTTCACTAAAGGTGCAGAATACGGGATCTGATGTTGTGTCTGAGATTTTGCTGTCCTTTCCTGAGAACCAGGCAAGTAACTTGGCATACTTGAAGGCAACACTTGGTGATGGGAAGGGAAAATCAAAACCATCTTCTGGTGTTGGTTTACCTGTCGAAGTTGTCCGGCCTAAAGATGTGCCACCTTCCTTGACAATTTATTCCGTGTCTTTACCTAAGGGGCTTGGGAAGGGAGATAGTCTGACGTTGGATGTCTTGGCTGTTTTTACCCACTCATTGCAACCATTTCCAGAGAAAATCAACCAGGCTGACATCCAGCTTCTACTGTTTCAAGAAAGTGCACACTATCTCTCCCCATATGCAGTCAAGGTCCAATCACTCACTGTTAAATTGCCTGATGCAAGGATAGAGTCCTATACAAAACTAGAAAATGCAAAACTTCAGGGATCTGAATTAAAATATGGTCCATATGAAAATCTTCCTCCATTTTCATACCTGCCAATAGTTATTCACTTTGAGAATAACCAACCCTTTGCTGTTGCTAAAGAGTTGGTTCGAGAGATCGAAATTTCCCATTGGGGCAATGTACAGATCACAGAGCATTACGATATTATCCATGCTGGTTCTCAGAGCAAAGGAGAATTTTCTAGGCTTGACTATCAGACCAGGCCATTTTTAAGAGGTGCATCAGCCTTTAGGCGTCTTGTTGCCAAGCTACCTCCAAGAGCTCATTCTGTGTACTACAGGGATGAAATTGGCAACATTTCCACTTCTAGTTTATGGGGTGACTCAAAAAAGACAGAACTGGAGATTGAACCTAGGTACCCTATGTTTGGTGGCTGGAAAACTGCCTTTACCATTGGATATGGCTTGCCACTTGGGGACTTCTTATTTGGATCGGATGGAAAGCGCTTCCTTAACATCTCTTTTGGTGCCCCTATTAATGAGTTGGTCATTGACACACTATTTGTGAAGGTTGTTTTGCCAGAGGGTTCTAAAGATATTTCAGTGTCTGTTCCATTTCCTGTGAAACAATCGGAGGAGACAAAGCTTTCCCACTTGGATATTGTTGGTAGACCTGTTGTTGTGCTGGAGAAGAACAATGTTGTTCCTGAGCATAATGAGCATTTTCAGGTCTACTATAAGTTCAACAGTCTTTCTATGCTCAGGGAGCCTTTGATGTTGATTTCTGGCTTTTTCTTTCTGTTTCTTGCTTGCATTGTCTACACGCATGCAGATATATCAATCTCCAAATCTTCTGCATCTTATTTGGCAAAGCTCCAGTTGGACGAGGTGCAAGCAACTATTCAGCAGGTCCATGGTATCATTAGCCGTTGCTTAACCGCACATGACAAGCTAGAAATGTCATTACACGATCTTTCAAGGACAGGAGACATTCAAGCCTGTAAAGCAACTCGAAAATCAGTCGATAGCTTACTGAAAGAGCTCTCTAAAGAGTTGAAGCAACCATTGGCAATTTTGCAATCTTCTCCGCAAGCTGCTCAAATATTACCGAAGGTGGAGGAACTTGTTACCAAGGAGAGAGAGTTGCAGGATAAACTTCTAGTAAAACACTCTACAGTTGTAGACGGCTATGAGAAGAAGTCAGCAGGAAGGGAAATTGAGAATCGGATTGCTTCACAACAGCTGAAAATTACTGCTTTGAGACGGGAGATTGATGATCTTATGGACTTGATTGATGAGATATGA 1842 0.4278 MSFILFPILFAFTFLSSPVLSASDLVLAKVDRRIDLTSQIVRITTSLKVQNTGSDVVSEILLSFPENQASNLAYLKATLGDGKGKSKPSSGVGLPVEVVRPKDVPPSLTIYSVSLPKGLGKGDSLTLDVLAVFTHSLQPFPEKINQADIQLLLFQESAHYLSPYAVKVQSLTVKLPDARIESYTKLENAKLQGSELKYGPYENLPPFSYLPIVIHFENNQPFAVAKELVREIEISHWGNVQITEHYDIIHAGSQSKGEFSRLDYQTRPFLRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPMFGGWKTAFTIGYGLPLGDFLFGSDGKRFLNISFGAPINELVIDTLFVKVVLPEGSKDISVSVPFPVKQSEETKLSHLDIVGRPVVVLEKNNVVPEHNEHFQVYYKFNSLSMLREPLMLISGFFFLFLACIVYTHADISISKSSASYLAKLQLDEVQATIQQVHGIISRCLTAHDKLEMSLHDLSRTGDIQACKATRKSVDSLLKELSKELKQPLAILQSSPQAAQILPKVEELVTKERELQDKLLVKHSTVVDGYEKKSAGREIENRIASQQLKITALRREIDDLMDLIDEI 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00133 613 Pfam Ribophorin I 27 453 IPR007676 GO:0006486|GO:0016021
Gma06g00133 613 PANTHER RIBOPHORIN I 5 591 IPR007676 GO:0006486|GO:0016021
Gma06g00133 613 Coils Coil 582 609 - -
Gma06g00133 613 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 5 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00133 Gma-Chr6 1161541 1165974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00133 23 551 Miscellaneous Gene Families AT1G76400 69.187 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00133 K12666 - gmx:100817203 1150.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00133 06 1161541 1165974 Gma06g00133 06 1161541 1165974 ECH
Gma04g00139 04 1192847 1197485 Gma06g00133 06 1161541 1165974 GST