Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00139 ATGAAAAGAGGCATCATGAGTTCGAATCTGTTTCTGTTTCCAATTCTCTTTTCATTTGCCTTTCTGTCCTCGCCCGTCCTCTCTGCTTCGGATCTGATCCTCGCCAAGGTTGACCGTCGCATTGATCTGACTTCACAGATTGTGCGCATCACTACTTCACTAAAGGTACAGAATACGGGATCTGATGTTGTATCTGAGATTTTGCTGTCCTTTCCTGAGAACCAGACAAGTAACTTGGCATACTTGAAGGCAGCACTTGGTGAAGGGAAGGGAAAAGCAAAACCATCTTCTGGTGTTGGTTTACCCGTCGAAGTTGTCCACCTGAAAGATGTGCCGCCTGCCTTGACAATTTATTCCGTATCTTTACCTAAGGGGCTTGGGAAGGGAGATATTCTGACGCTGGATGTCTTGGCTGTTTTTACCCACTCATTGCAACCATTTCCAGAGAAAATCAACCAGGCTGACATCCAGCTTCTACTATTTCAAGAAAGTGCACGCTATCTCTCCCCATATGCAGTCAAGGTCCAATCACTCACTGTTAAATTGCCTGATGCAAGAATAGAGTCCTATACAAAACTAGGAAATGCAAAACTTCAGGGATCTGAATTAAAATATGGTCCATATGAGAATCTTCCTCCATTTTCATACTTGCCAATAGTTGTTCACTTTGAGAATAACCAACCCTTCGCTGTTGCTAAAGAGTTGGTGCGAGAGATCGAAATTTCCCATTGGGGCAATATACAGATCACAGAGCATTACAGTATTATCCATGCTGGTGCTCAGAGCAAAGGAGAATTTTCTAGGCTTGACTATCAGACCAGGCAATTTTTAAGAGGTGCATCAGCCTTTAGGCGTCTTGTTGCCAAGCTACCACCAAGAGCTCATTCTGTGTACTACAGGGATGAAATTGGCAACATTTCCACTTCTAGTTTATGGGGTGACTCAAAAAAGACAGAACTGGAGATTGAACCTAGGTACCCTATGTTTGGTGGCTGGAAAACTGCCTTTACCATTGGATATGGCTTGCCACTTCGAGACTTCTTATTTGGATCGGATGGAAAGCGCTTCCTTAATATCTCTTTTGGTGCCCCTATTAGTGAGTTGGTCATTGACACACTCTTTGTGAAGGTTGTTTTGCCAGAGGGTTCTAAAGATATTTCAGTATCTGTTCCATTTCCTGTGAAACAATCGCAGGAGACAAAGCTTTCCCACTTGGATATTGTTGGTAGACCTGTTGTTGTGCTGGAGAAGAACAATGTTGTACCTGAGCATAATGAGCATTTTCAGGTCTACTATAAGTTCAACAGTCTTTCTATGCTCAGGGAGCCTTTGATGTTGATTTCTGGCTTTTTATTTCTGTTTGTTGCGTGCATTGTCTACACGCATGCAGATATATCAATCTCCAAATCTTCTGCATCTTATTTGGCAAAGCTCCAGTGGGACGAGGTGCAAGCAACTATTCAGCAGGTCCATGGTATCATTGGCCGCTGCTTAACTGCACATGACAAGCTAGAAGCGTCATTACACGATCTTTCCAGGACAGGAGACACTCAAGCCTGTAAAGCAACTCGAAAATCAGTTGATAGCTCGTTGAAAGAGCTCTCTAAAGAGTTGAAGCAACCATTGGCAATTTTGCAATCTTCTCCGCAAGCTGCTCAAATATTACCCAAGGTGGAGGAACTTGTTACTAAGGAGAGAGAGTTGCAGGATAAACTTCTAGTAAAACACTCTACAATTGTAGACGCCTATGAGAAGAAAGCAGGAAGGGAAATTGAGAATCGGATTGCTTCACAACAGCAGAAAATTACTGCTTTGAGACGGGAGATTGATGATCTTATGGACTTGATTGATGAGATATGA 1860 0.429 MKRGIMSSNLFLFPILFSFAFLSSPVLSASDLILAKVDRRIDLTSQIVRITTSLKVQNTGSDVVSEILLSFPENQTSNLAYLKAALGEGKGKAKPSSGVGLPVEVVHLKDVPPALTIYSVSLPKGLGKGDILTLDVLAVFTHSLQPFPEKINQADIQLLLFQESARYLSPYAVKVQSLTVKLPDARIESYTKLGNAKLQGSELKYGPYENLPPFSYLPIVVHFENNQPFAVAKELVREIEISHWGNIQITEHYSIIHAGAQSKGEFSRLDYQTRQFLRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPMFGGWKTAFTIGYGLPLRDFLFGSDGKRFLNISFGAPISELVIDTLFVKVVLPEGSKDISVSVPFPVKQSQETKLSHLDIVGRPVVVLEKNNVVPEHNEHFQVYYKFNSLSMLREPLMLISGFLFLFVACIVYTHADISISKSSASYLAKLQWDEVQATIQQVHGIIGRCLTAHDKLEASLHDLSRTGDTQACKATRKSVDSSLKELSKELKQPLAILQSSPQAAQILPKVEELVTKERELQDKLLVKHSTIVDAYEKKAGREIENRIASQQQKITALRREIDDLMDLIDEI 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00139 619 Coils Coil 588 619 - -
Gma04g00139 619 PANTHER RIBOPHORIN I 12 597 IPR007676 GO:0006486|GO:0016021
Gma04g00139 619 Pfam Ribophorin I 35 460 IPR007676 GO:0006486|GO:0016021
Gma04g00139 619 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 12 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00139 Gma-Chr4 1192847 1197485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00139 30 558 Miscellaneous Gene Families AT1G76400 68.809 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00139 K12666 - gmx:100796192 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00139 04 1192847 1197485 Gma04g00139 04 1192847 1197485 ECH
Gma04g00139 04 1192847 1197485 Gma06g00133 06 1161541 1165974 GST