Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00126 ATGGCGTTCATTTGGCGGTTCTGTGGTGTGTCTCTATGCAACTTCACAGCCTCTAATGCCCAGAAAGGTCCTTCTCCTTCTCTGCCCATAACCTTGGACTTGGAGCATCATATAACAACCCCATCTTTACTTTCTTCCATCGAAGAAGAAGAAGGACGCGCGGTTAATAGGAGACAACTTATTCTTCACACGCCAGTAGCTGCAGCAGCTGCATTTGCAGTCCCAAATGCATTGGCACTCAATGATGTGTCTGAGGATGTTCGTGTCTACACTGACGATGAGAACAAGTTCAAGATTGAGATTCCCGAAGAGTGGCAAGTGGGAACAGGAGACGGAGAATCTAGTGGGTTTAAATCCATAACTGCTTTCTACCCAACACAGGCATCCAATTCCAATGTGAGCGTTGTGATCACAGGGCTGGGACCGGATTTCACCAGGATGGAATCCTTTGGCAAAGTTGACGAGTTTGCTCAGACTCTAGTTAGTGGGCTTGACAGAAGCTGGCGAAAACCCCCGGGTGTGGCTGCTAAACTCATAGATTGTAAATCATCTAATGGGATTTATTACATCGAGTATTTGCTGCAAAATCCTGGTGAGAGTCGCAGGTATTTGTATTCAGCTATTGGGATGGCATCAAATGGTTGGTATAACAGACTGTATACCGTGACAGGACAGTATGTGGAAGAGGACACAGACAAGTATGCTTCAAAAGTTCAGAAGGTAGTTGCATCATTTAGGTTCATATGA 747 0.4552 MAFIWRFCGVSLCNFTASNAQKGPSPSLPITLDLEHHITTPSLLSSIEEEEGRAVNRRQLILHTPVAAAAAFAVPNALALNDVSEDVRVYTDDENKFKIEIPEEWQVGTGDGESSGFKSITAFYPTQASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVAAKLIDCKSSNGIYYIEYLLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEDTDKYASKVQKVVASFRFI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00126 248 PANTHER - 41 248 - -
Gma06g00126 248 Pfam PsbP 86 247 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gma06g00126 248 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 41 248 - -
Gma06g00126 248 SUPERFAMILY Mog1p/PsbP-like 88 247 IPR016123 -
Gma06g00126 248 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 79 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00126 Gma-Chr6 1104416 1106846 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00126 - - gmx:100805637 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00126 06 1104416 1106846 Gma06g00126 06 1104416 1106846 ECH
Gma04g00133 04 1138626 1140693 Gma06g00126 06 1104416 1106846 GST