Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00133 ATGGCGTCCATTTCGCGGTTCTGTTGTGTGCATATGCGAGCGTCTCTATGCAACTTCACAGCCCAGAAAGGTCCTTCTCCTTCACTACCCTCCCCATTAACTCATTTTTCTTCTACTTCCAACATCCCTCAAGGACGTGCGGTTAATAGGAGACAACTTATTCTTCACACGCCAGTAGCAGTAGCTGCATTTGCAGTCCCAAATGCATTGGCACTCAATGTTTCAGATGTGTCTGAGGATGTTCGTGTCTACACTGACGATGAGAACAAGTTCAAGATTGAGATTCCCCAAGAGTGGCAAGTGGGAACAGGAGACGGAGAATCTAGTGGGTTTAAATCCATAACTGCTTTCTACCCAACAGTGGCATCCAATTCCAATGTGAGCGTTGTGATCACAGGGCTGGGACCGGATTTCACTAGGATGGAATCCTTTGGCAAAGTTGACGAGTTTGCCCAGACTCTAGTTAGTGGGCTTGACAGAAGCTGGCGAAAACCCCCGGGTGTGGCTGCTAAACTCATAGATTGTAAATCATCTGATGGGATTTATTACATCGAGTATTCGCTGCAAAATCCCGGTGAGAGTCGCAGGTATTTATATTCAGCTATCGGGATGGCATCAAATGGTTGGTATAACAGACTGTATACGGTGACAGGACAGTATGTGGAAGAGGAAACAGACAAGTATGCTTCAAAAGTTCAGAAGGTAGTTGCATCATTTAGGTTCATATGA 729 0.4568 MASISRFCCVHMRASLCNFTAQKGPSPSLPSPLTHFSSTSNIPQGRAVNRRQLILHTPVAVAAFAVPNALALNVSDVSEDVRVYTDDENKFKIEIPQEWQVGTGDGESSGFKSITAFYPTVASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVAAKLIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEETDKYASKVQKVVASFRFI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00133 242 PANTHER - 40 242 - -
Gma04g00133 242 SUPERFAMILY Mog1p/PsbP-like 82 241 IPR016123 -
Gma04g00133 242 Pfam PsbP 80 241 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gma04g00133 242 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 70 241 - -
Gma04g00133 242 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 40 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00133 Gma-Chr4 1138626 1140693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00133 - - gmx:100785276 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00133 04 1138626 1140693 Gma04g00133 04 1138626 1140693 ECH
Gma04g00133 04 1138626 1140693 Gma06g00126 06 1104416 1106846 GST