Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00088 ATGGGCGCTGCTTGTTGTGTTGCTGCCAGAGACAAAACCATACAAAGTGGATCAACCAGTGACAATTTGCATCGGAATGTTCGATGTTCTCCAACATGGAGCTTTCGTTGGGATCATCGAGGGCGTGTAGCTGGTGAAGATACTTCTATAAATTGGTTTTCTGACGGTATTAGCAGGAATGATGGATCAGAGAATAAAAATGAATCAACATATATGTCAGAGGACGGAAGTCCACTGCAGAATGATCAACGGAAAAGATGCCAAAAACCATCAATTTCGCAAGTAACTGCTGCACATAGGAGAAATTCAACTTCAGACCAATCTTTTTCAAGGACTGTTTCTACAGATGTGAGCGTCGAACAGGTGAATAGGTTGGCAGAATCATCAATAGTATCTTGCCCATCTCCCACAAAACCATCACTGCCTTCAACTTCATTATCAGCATCTCCTTTATCATCTCCATGTCACATACCTCCATCGAGCTCGGCACCTTTAAGGTGGCCCTGCCATTCCCCAGGACACCACCTATCACGGCAAGCTTCCGATAGCCGTATCCCAGCAGTTAAGTCACCCAGCAGCTTCTCTTTGTCTGAAGAAAGGGCTGTGTTTTCTTCATGGAGCAATGAAGTGGGTATGCACTCCCATGGTGGATCTTCAGATGGTTGGTCTATTCCTGGCTTTTCTGAGCTGATGGGAACTCCCCACAGAGAAAGATGGTCATTTGATAGTGAGTCATTTGGTTTTAACCGAGAAAGATTAGCTAGACCCAGTAGTTGGTTTTCAGCTTCACCAGTTGATTTGCAATCATGTGGTATTTGCTCAAAGCTTTTAGCAGAGAAGTCTTCTTGGAGCACTCAAAAGATAATTGCAAGTAATGACCTTTCTGTAGTTGCTGTCCTCATCTGTGGACATGTCTATCATGCTGAATGTTTGGAGATTATGACACCTGATATCAATAAGTATGATCCAGCTTGCCCAGTTTGCACTTTTGGTGAGAAACAAACTATGAAGTTGTCTGAAAAAGCTCTGAAAGCTGAAATGGATTTGAAGGCTAGAACCAATAAATCAAAGAATCGGGTTGTGGACAGTGATATTGATGATGATTCTGTTGTGTTTCATCACTTTAAAGGGAGAGGGCTTAAAGGTAAAAGTCCTAGGATAGACTCCAGTTCCAATGGGAGAAGCTCCTATGGGAAACCTTTTCTGAGGCGACACTTTTCCTTTGGATCAAAGGGTTCCAGATCTACATTAGATAATCACCCTACAAGAAAGAAGGGTTTCTTTTGGGCAAAATCTAGCAAGGAATAA 1308 0.4274 MGAACCVAARDKTIQSGSTSDNLHRNVRCSPTWSFRWDHRGRVAGEDTSINWFSDGISRNDGSENKNESTYMSEDGSPLQNDQRKRCQKPSISQVTAAHRRNSTSDQSFSRTVSTDVSVEQVNRLAESSIVSCPSPTKPSLPSTSLSASPLSSPCHIPPSSSAPLRWPCHSPGHHLSRQASDSRIPAVKSPSSFSLSEERAVFSSWSNEVGMHSHGGSSDGWSIPGFSELMGTPHRERWSFDSESFGFNRERLARPSSWFSASPVDLQSCGICSKLLAEKSSWSTQKIIASNDLSVVAVLICGHVYHAECLEIMTPDINKYDPACPVCTFGEKQTMKLSEKALKAEMDLKARTNKSKNRVVDSDIDDDSVVFHHFKGRGLKGKSPRIDSSSNGRSSYGKPFLRRHFSFGSKGSRSTLDNHPTRKKGFFWAKSSKE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00088 435 MobiDBLite consensus disorder prediction 53 114 - -
Gma06g00088 435 SUPERFAMILY RING/U-box 263 329 - -
Gma06g00088 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 330 IPR013083 -
Gma06g00088 435 PANTHER EXPRESSED PROTEIN 1 429 - -
Gma06g00088 435 SMART ring_2 270 328 IPR001841 -
Gma06g00088 435 MobiDBLite consensus disorder prediction 379 398 - -
Gma06g00088 435 ProSiteProfiles Zinc finger RING-type profile. 270 329 IPR001841 -
Gma06g00088 435 MobiDBLite consensus disorder prediction 169 190 - -
Gma06g00088 435 PANTHER BNAA09G43140D PROTEIN 1 429 - -
Gma06g00088 435 MobiDBLite consensus disorder prediction 128 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00088 Gma-Chr6 777822 782373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00088 - - gmx:100795372 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00088 06 777822 782373 Gma06g00088 06 777822 782373 ECH
Gma04g00092 04 797889 803554 Gma06g00088 06 777822 782373 GST