Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00092 ATGGGTGCTGCTTGTTGTGTTGCTGCCAGAGACAAAACTATACAAAGTGGATCAACCAGTGACAATTTGCATCGGAATGCTCGATGTTCTCCAACATGGAGCTTTCGGTGGGATCATCGGGGGCGTGTAGCTGGTGAAGATACTTCTATAAATTGGTTTTCAGATGGTATTAGCAGGAATGATGGATCAGAGAATAAAAATGAATCAGCATATGTGTCAGAGGATGGAAGTCCACTGCAGAATTATCAACAGAAAAGATGCCAAAAACCACCAATTTCAGAAGTAACTGCTGCACACAGGAGAAATTCAACTTCAGACCAATCTTTTTCAAGGACTGTTTCTACGGATGTGAACATCGAACAGGTGAATGGGTTGGCAGAATCATCAATAGTATCTTGCCCATCTCCCACAAAACCATCACTGCCTTCAACTTCATTATCAGCATCTCCTTTATCATCTCAATGTCACATACCTCCATCAAGTTCGACCCCTTTGAGGTGGCCCTGCCATTCCCCAGGACACCAGCTATCACAGCAAGCTTATGATAGCCGTATCCCAGCAGTTAAGTCACCCAGCAGCTTCTCTTTGTCTGACGAAAGGCCTGTGTTTTCTTCATGGAGCAATGAAGTGGGTATGCACTCCCATGGTGGATCTTCAGATGGTTGGTCTATACCTGGCTTTTCTGAGCTGATGGGAACACCCCAGAGAGAAAGATGGTCATTTGATAGTGAGTCCTATGGTTTTAACCGAGAAAGATTAGCTAGACCCAGTAGTTGGTTTTCAGCTTCACAAGTTGATTTGCAATCATGTGGTATTTGCTCAAAGCTTTTAGCAGAGAAGTCTTCTTGGAGCATGCAAAAGATAATTGCAAGTAATGACCTTTCTGTAGTTGCTGTCCTTGTCTGTGGACACGTCTGTCATGCTGAATGTTTGGAGATTATGACACCTGATATCAATAAGTATGATCCAGCTTGCCCAGTTTGCACTTTTGGTGAGAAACAAACTATAAAGTTGTCTGAAAAAGCTCTGAAAGCTGAAATGGATTTGAAGGCTAGAAACAATAAATCAAAGAATCGGGTTGTGGACAGTGATATTGACGATGATTCTGTTGTGTTTGATCACTTTAAAGGGAGAGGGCTTAAAGCAAGGAATAATCTGCTTCTTGGTTATTCGGAGGTTCCACTGTTGATCTTCTGTGCATCCTCAATTGTGTTTGAGACCAAGGTTCTATCTGCATTGTACAGTGATGAAATTTGCGTATATTTAGCATCATCTAGACGTTTCCAAATTCCAAGTAGGGGGAGTATCGGACAAGCAGCAGATACTATTCAAGAGTTGAAGGAAATGGCTGAAGCACAACTACGAGACCAGCATGGCAACCCTGTCCCACTCACCGATCAATACGGTAATCCGGTTATCTTAACTGACGAGCGCGGTAATCCCGTCCAACTCACTGGTGTCGCTACCACCGCTACCGGCACAGCAGGTTCTGGGTTTGGGTCCTATGGTACCGGTGCTTACGGTGGTGGTGCAAGTGCAACCACCGTTGCAGATCTTTTGGCAACCCAACCAAGGAGTGGCAGGGAGGCTAGAGAGCTTCGTCGTTCCTCCAGTTCAAGCTCTAGCTCGTCTGAGGATGATGGGCAAGGTGGGAGGAGGAAGAAGGGAGTGAAGGATAAAATAAAAGAGAAACTACCAGGGGTAGGAGGAGGGAATAATAATAAGGAGCATGCACACACAACAACTGCTCCAACCACCGCCACTAACCACCCTGCTGATCAGCATGAGAAGAAGGGCATAATGGAGAGGATCAAAGAAAAATTGCCTGGCCACCACACCCACTGA 1845 0.4515 MGAACCVAARDKTIQSGSTSDNLHRNARCSPTWSFRWDHRGRVAGEDTSINWFSDGISRNDGSENKNESAYVSEDGSPLQNYQQKRCQKPPISEVTAAHRRNSTSDQSFSRTVSTDVNIEQVNGLAESSIVSCPSPTKPSLPSTSLSASPLSSQCHIPPSSSTPLRWPCHSPGHQLSQQAYDSRIPAVKSPSSFSLSDERPVFSSWSNEVGMHSHGGSSDGWSIPGFSELMGTPQRERWSFDSESYGFNRERLARPSSWFSASQVDLQSCGICSKLLAEKSSWSMQKIIASNDLSVVAVLVCGHVCHAECLEIMTPDINKYDPACPVCTFGEKQTIKLSEKALKAEMDLKARNNKSKNRVVDSDIDDDSVVFDHFKGRGLKARNNLLLGYSEVPLLIFCASSIVFETKVLSALYSDEICVYLASSRRFQIPSRGSIGQAADTIQELKEMAEAQLRDQHGNPVPLTDQYGNPVILTDERGNPVQLTGVATTATGTAGSGFGSYGTGAYGGGASATTVADLLATQPRSGREARELRRSSSSSSSSSEDDGQGGRRKKGVKDKIKEKLPGVGGGNNNKEHAHTTTAPTTATNHPADQHEKKGIMERIKEKLPGHHTH 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00092 614 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 330 IPR013083 -
Gma04g00092 614 MobiDBLite consensus disorder prediction 522 614 - -
Gma04g00092 614 PANTHER EXPRESSED PROTEIN 1 377 - -
Gma04g00092 614 CDD RING-H2 270 328 - -
Gma04g00092 614 MobiDBLite consensus disorder prediction 591 614 - -
Gma04g00092 614 SUPERFAMILY RING/U-box 264 329 - -
Gma04g00092 614 ProSiteProfiles Zinc finger RING-type profile. 270 329 IPR001841 -
Gma04g00092 614 Pfam Dehydrin 453 612 IPR000167 GO:0009415
Gma04g00092 614 ProSitePatterns Dehydrins signature 1. 540 555 IPR030513 -
Gma04g00092 614 ProSitePatterns Dehydrins signature 2. 603 610 IPR030513 -
Gma04g00092 614 MobiDBLite consensus disorder prediction 547 565 - -
Gma04g00092 614 MobiDBLite consensus disorder prediction 54 83 - -
Gma04g00092 614 PANTHER BNAA09G43140D PROTEIN 1 377 - -
Gma04g00092 614 MobiDBLite consensus disorder prediction 574 590 - -
Gma04g00092 614 MobiDBLite consensus disorder prediction 130 171 - -
Gma04g00092 614 SMART ring_2 270 328 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00092 Gma-Chr4 797889 803554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00092 - - gmx:100778123 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00092 04 797889 803554 Gma04g00092 04 797889 803554 ECH
Gma04g00092 04 797889 803554 Gma06g00088 06 777822 782373 GST