Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00045 ATGTCGAGCATCGTCAAGGAGATCCTGGCGAGCCCGATACAAATGGCGGACCAGGTTTCGAAGCTTGCGGAAGAGGCCCAGAATTTCCGACAGGAATGTCTGGAGCTGAAATCCAAAACTGAGAAGCTGGCGGGCCTCCTCCGCCAGGCCGCCAGGAATAGCAACGACCTCTACGAGCGTCCCACGCGCCGCATCATCGACGACACCGAACAAGTCCTCGACAAGGCCCTCGTTCTCGTCACCAAATGTCGCGCCAACAGCCTCATCAAGAAGCTCTTCACCATCATCCCCGCCACAGCCTTCCGCAAGACCTCCATGCAGCTCGAGAATTCCGTCGGTGACGTCCAATGGCTCCTCCGCGTCTCTGCCTCCGCCGACGAGCGCGACGACGAGTACCTCGGCCTCCCTCCCATCGCCGCCAACGAGCCCATCCTCTGCCTCATCTGGGAACAGGTCGCCATTCTTCTCTCCGGCGCTTCCTTGGACGAACGTTCCGACGCTGCCGCTTCCCTCGTCTCCCTCGCTCGCGACAACGACCGTTACGGGAAACTCATCATCGAAGAAGGAGGCGTGCCACCGCTGTTGAAGCTTCTCAAGGAAGGAAGAATGGACGGTCAGGAAAACGCTGCCAGAGCCATCGGGTTGCTTGGGAAAGATCCTGAAAGCGTGGAACACATTGTCAATGCTGGTGTCTGTTCCGTGTTTGCCAAGGTCCTCAAAGAAGGCCACATGAAGGTTCAAACGGTTGTTGCGTGGGCTATTTCTGAACTCGCCGCGAATCACCCGAAATGCCAGGATCATTTTTCTCAGAACAATGCCATACGCTTGCTGGTTAGCCATCTGGCGTTTGAGACAATTCAAGAGCATAGCAAGTACGCCATTGCGAACAAACACAAATCCATTCACTCGGTTTTAATGGCGAGTAACACAACGAGCGCGCAGGAAGAGGAAGATGATAAGCAGATGGTGGCTCACCCGGGGGCGAATCAGTCAGCCAATCTGATGCACAACGTGGTTTCCAACACAATGGCCATAAAGGGAGCCATGGTGGAGGAGGAGAAAGCCAACAACAAGAAGCAACAACAACAACAGCAGCAGCAGCAGCAGAGTGGGAATAATTCGCAAATGTCAATTGCAGGGACGAGTATTAAGGGGAGGGAATATGAAGACGCGGGGACAAAGGCACAGATGAAGGCCATGGCAGCCAGAGCCTTATGGCAACTCTCGAGGGGAAACTTGACAGTGTGTAGGAGCATAACAGAGTCAAGGGCTCTCTTGTGTTTCGCGGTTCTGTTGGAAAAAGGACCAGACGATGTGCAATCGTATTCGGCAATGGCGTTGATGGAAATCACTGCAGTGTCGGAGCAACATTCGGAGCTGAGGCGCTCTGCTTTCAAGCCAACTTCCCCGGCAGCCAAGGCAGTGGTGGATCAACTCCTAAAAGTAATCGAAAAAGAACAACCGGACCTGCTCATAGCTTGCGTGAGATCAGTGGGAAATTTGGCGAGGACATTCAGAGCAACCGAAACAAGACTCATAGGGCCGTTGGTGAGGCTTCTGGACGAAAGAGAGGCGCAGGTTAGCATGGAAGCGGCCATTGCGCTCAATAAATTTGCTTGTACGGACAACTACCTTCATGAGAATCACTGCAACGCCATCATAGAGGCAGGGGGCGCCAAGCACTTGATTCAACTCGTTTACTTTGGGGAGCAAATGGTTCAGATTCCTTCCGTCACGCTGCTTTGTTACATAGCGCTGCACGTCCCCAAAAGCGAGACTCTGGCGCAAGAAGAGGTGCTCATTGTTCTCGAATGGTGCACCAAGCAGGCACATCTCATCGAGGAACCCTCCATCCAACCACTCTTACCAGAGGCCAAGAGCAGGCTCGAACTCTATCAATCAAGAGGAAGAGGATTCCGCTGA 1923 0.5372 MSSIVKEILASPIQMADQVSKLAEEAQNFRQECLELKSKTEKLAGLLRQAARNSNDLYERPTRRIIDDTEQVLDKALVLVTKCRANSLIKKLFTIIPATAFRKTSMQLENSVGDVQWLLRVSASADERDDEYLGLPPIAANEPILCLIWEQVAILLSGASLDERSDAAASLVSLARDNDRYGKLIIEEGGVPPLLKLLKEGRMDGQENAARAIGLLGKDPESVEHIVNAGVCSVFAKVLKEGHMKVQTVVAWAISELAANHPKCQDHFSQNNAIRLLVSHLAFETIQEHSKYAIANKHKSIHSVLMASNTTSAQEEEDDKQMVAHPGANQSANLMHNVVSNTMAIKGAMVEEEKANNKKQQQQQQQQQQSGNNSQMSIAGTSIKGREYEDAGTKAQMKAMAARALWQLSRGNLTVCRSITESRALLCFAVLLEKGPDDVQSYSAMALMEITAVSEQHSELRRSAFKPTSPAAKAVVDQLLKVIEKEQPDLLIACVRSVGNLARTFRATETRLIGPLVRLLDEREAQVSMEAAIALNKFACTDNYLHENHCNAIIEAGGAKHLIQLVYFGEQMVQIPSVTLLCYIALHVPKSETLAQEEVLIVLEWCTKQAHLIEEPSIQPLLPEAKSRLELYQSRGRGFR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00045 640 Gene3D - 151 376 IPR011989 -
Gma06g00045 640 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 189 231 IPR000225 GO:0005515
Gma06g00045 640 PANTHER ARMADILLO REPEAT ONLY 1 1 639 - -
Gma06g00045 640 MobiDBLite consensus disorder prediction 352 377 - -
Gma06g00045 640 Gene3D - 383 625 IPR011989 -
Gma06g00045 640 PANTHER ARMADILLO REPEAT ONLY 4 1 639 - -
Gma06g00045 640 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Gma06g00045 640 Pfam Armadillo/beta-catenin-like repeat 219 259 IPR000225 GO:0005515
Gma06g00045 640 Coils Coil 19 39 - -
Gma06g00045 640 SMART arm_5 468 503 IPR000225 GO:0005515
Gma06g00045 640 SMART arm_5 546 586 IPR000225 GO:0005515
Gma06g00045 640 SMART arm_5 412 452 IPR000225 GO:0005515
Gma06g00045 640 SMART arm_5 177 218 IPR000225 GO:0005515
Gma06g00045 640 SMART arm_5 219 259 IPR000225 GO:0005515
Gma06g00045 640 Coils Coil 345 370 - -
Gma06g00045 640 SUPERFAMILY ARM repeat 155 605 IPR016024 -
Gma06g00045 640 Gene3D - 3 121 IPR036537 GO:0007166
Gma06g00045 640 MobiDBLite consensus disorder prediction 359 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00045 Gma-Chr6 403645 405567 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00045 - - gmx:100807066 1221.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00045 06 403645 405567 Gma06g00045 06 403645 405567 ECH
Gma04g00051 04 435883 437787 Gma06g00045 06 403645 405567 ECH