Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00051 ATGTCGAGCATCGTCAAGGAGATCCTGGCGAGCCCGATACAAATGGCGGACCAGGTTTCGAAGCTGGCTGAGGAGGCCCAGAATTTCCGACAGGAATGTCTGGAGCTGAAATCCAAATCGGAGAAGCTGGCGGGCCTCCTCCGCCAGGCCGCCAGGAACAGCAACGATCTCTACGAGCGTCCCACGCGCCGCATCATCGACGACACCGAACAAGTCCTCGACAAGGCCCTGGCGCTCGTTACCAAATGCCGCGCCAACAGCCTCATCAAGAAGCTCTTCACCATCATCCCCGCCACTGCCTTCCGCAAGACCTCCATGCAGCTCGAGAATTCCGTCGGCGACGTCCAGTGGCTCCTCCGGGTCTCCGCCTCCGCCGACAAGCGCGACGACGAGTACCTCGGCCTCCCTCCCATCGCCGCCAACGAGCCCATCCTCTGCCTCATTTGGGAGCAGGTCGCTATTCTTCTCTCCGGCGCTTCCTTGGACGAACGTTCCGACGCTGCCGCCTCGCTCGTCTCTCTCGCTCGCGACAACGACCGTTACGGGAAGCTCATCATCGAAGAAGGCGGCGTCCCCCCTCTGCTTAAGCTCCTCAAGGAAGGAAGAATGGACGGTCAGGAAAACGCCGCCAGAGCCATCGGCTTGCTCGGGAAAGATCCTGAAAGCGTGGAGCACATTGTCAACTCCGGTGTCTGTTCCGTGTTTGCCAAGGTCCTCAAAGAAGGCCACATGAAGGTTCAAACGGTTGTTGCCTGGGCTATCTCTGAACTCGCCGCGAATCACCCGAAATGCCAGGATCATTTTTCGCAGAACAACGCCATACGCTTGCTGGTTAGCCATCTGGCGTTTGAGACAATTCAAGAGCATAGCAAGTACGCCATTGCGAACAAACACAAATCCATTCACTCGGTTCTAATGGCGAGTAATACAACCAGCGCGCAGGAAGAGGATGATGATAAGCAGGTTTCTCACCCCATGTCGGGTCAGTCATCCACTCTAATGCACAACGTGGTTTCCAACACAATGGCCATAAAGAGCGCCATGGAGGAGGATGACAAAGCCAACACCAAGAAACAACAACAGCAACAGAGTGGGAATGGTTCGCACTTGGCAATTGCTGGGAAGAGTATTAAGGGGAGGGAATATGAAGACGCGGGGACCAAGGCACAGATGAAGGCCATGGCAGCCAGAGCCTTATGGCAACTCTCGAGGGGAAACTTGACCGTGTGTCGGAGCATAACAGAGTCAAGGGCTCTATTGTGTTTCGCGGTTCTTTTGGAAAAAGGACCAGACGATGTGCAATCGTATTCGGCAATGGCGTTGATGGAAATCACTGCAGTGTCGGAGCAACATTCGGAGCTGAGGCGCTCTGCTTTCAAACCAACTTCCCCTGCTGCCAAGGCTGTGGTGGAGCAGCTCCTTAAAGTAATCGAAAAAGAACAAGCGGAACTTCTCATAGCTTGCGTCAGATCCGTGGGAAATTTGGCGAGGACGTTCAGAGCCACCGAAACAAGACTCATAGGGCCGTTGGTGAGGCTTCTGGACGAAAGAGAGGCGCAGGTTAGCATGGAAGCGGCCATTGCGCTCAACAAATTTGCTTGTACGGACAACTACCTTCATGAGAATCACTGCAACGCCATCATAGAGGCAGGGGGCGCCAAGCACTTGATTCAACTCGTTTACTTTGGGGAGCAAATGGTTCAGATTTCTTCCGTTACTCTGCTTTGTTACATAGCGCTGCACGTCCCCAAAAGCGAGACACTGGCGCAAGAAGAGGTGCTCATTGTTCTCGAGTGGTGCACCAAGCAGCCACATCTCATCGACCAACCCTCCATCCAACCACTCTTACCAGAAGCCAAGAGCAGGCTCGAACTCTATCAATCCAGAGGAAGAGGATTCCGCTGA 1905 0.5444 MSSIVKEILASPIQMADQVSKLAEEAQNFRQECLELKSKSEKLAGLLRQAARNSNDLYERPTRRIIDDTEQVLDKALALVTKCRANSLIKKLFTIIPATAFRKTSMQLENSVGDVQWLLRVSASADKRDDEYLGLPPIAANEPILCLIWEQVAILLSGASLDERSDAAASLVSLARDNDRYGKLIIEEGGVPPLLKLLKEGRMDGQENAARAIGLLGKDPESVEHIVNSGVCSVFAKVLKEGHMKVQTVVAWAISELAANHPKCQDHFSQNNAIRLLVSHLAFETIQEHSKYAIANKHKSIHSVLMASNTTSAQEEDDDKQVSHPMSGQSSTLMHNVVSNTMAIKSAMEEDDKANTKKQQQQQSGNGSHLAIAGKSIKGREYEDAGTKAQMKAMAARALWQLSRGNLTVCRSITESRALLCFAVLLEKGPDDVQSYSAMALMEITAVSEQHSELRRSAFKPTSPAAKAVVEQLLKVIEKEQAELLIACVRSVGNLARTFRATETRLIGPLVRLLDEREAQVSMEAAIALNKFACTDNYLHENHCNAIIEAGGAKHLIQLVYFGEQMVQISSVTLLCYIALHVPKSETLAQEEVLIVLEWCTKQPHLIDQPSIQPLLPEAKSRLELYQSRGRGFR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00051 634 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 189 231 IPR000225 GO:0005515
Gma04g00051 634 Coils Coil 19 39 - -
Gma04g00051 634 SUPERFAMILY ARM repeat 155 599 IPR016024 -
Gma04g00051 634 MobiDBLite consensus disorder prediction 349 376 - -
Gma04g00051 634 Gene3D - 3 121 IPR036537 GO:0007166
Gma04g00051 634 PANTHER ARMADILLO REPEAT ONLY 4 1 633 - -
Gma04g00051 634 Gene3D - 152 316 IPR011989 -
Gma04g00051 634 SMART arm_5 219 259 IPR000225 GO:0005515
Gma04g00051 634 SMART arm_5 462 497 IPR000225 GO:0005515
Gma04g00051 634 SMART arm_5 177 218 IPR000225 GO:0005515
Gma04g00051 634 SMART arm_5 540 580 IPR000225 GO:0005515
Gma04g00051 634 SMART arm_5 406 446 IPR000225 GO:0005515
Gma04g00051 634 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Gma04g00051 634 Pfam Armadillo/beta-catenin-like repeat 219 259 IPR000225 GO:0005515
Gma04g00051 634 Gene3D - 375 617 IPR011989 -
Gma04g00051 634 PANTHER ARMADILLO REPEAT ONLY 1 1 633 - -
Gma04g00051 634 MobiDBLite consensus disorder prediction 310 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00051 Gma-Chr4 435883 437787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00051 - - gmx:100794618 1212.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00051 04 435883 437787 Gma04g00051 04 435883 437787 ECH
Gma04g00051 04 435883 437787 Gma06g00045 06 403645 405567 ECH