Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00036 ATGGAAACTCGTAGTCGTAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCATCCTCGTCCACCACCACCACCACCGCCTCTCGTTCCGCCAAGTGCTCTCGTCTTTCTTCTTCTTCTTCTTCCATCCCAAACACAACTACTGCTAATACACGTTCTCGTTCCGCCAGGAACAACAACAACAACTCCGTTTCTCCCATGGACCCCACCAATGAATCCTCCGGTTCCAGACGTGATCGCCGCGGCAAGAATTTCGATAGGGACAATTCGGACAAAGGGAAGGAGAAAGAACATGATGTTAGGATTAGGGATGCGGAGCGGGAGCGAGCCTTGGCGTTGAACTTGGAGGCTGAAGATGTTGGGGATGACGACGATGATAATGATAGTGAGGGCGGTGTCGGAATTCTGCACCAGAATTTGATTTCTGCCAGTACCTTTCGAGGGCTTCTTCGGAAACTTGGTGCTGGTTTGGATGATTTGCTTCCTGCTACGGCTATGGGCGGTTCTGTGCCCTCTTCTCACCAGACTGGCGGACTCAAGCAGATATTGTCTGGTTTGCGTGCCGATGGGGAAGAAGGTCGTCAGGTTGAGGCATTGACGCATCTTTGTGACATGCTCTCCATTGGCACTGAAGATTCATTAAGTACATTTTCGGTTGATTCATTTGTTCCTGTGCTAGTGGGCTTGCTTAATCATGAGAGCAATCCCGATGTCATGCTTCTTGCGGCCAGGGCGCTAACCCATTTATGTGATGTGCTTCCTTCATCCTGTGCTGCTGTTGTGCATTATGGTGCAGTCTCTATCTTCTGTGCGAGGCTGCTTACCATAGAGTATATGGACTTGGCTGAGCAGCAGTCTCTTCAAGCACTAAAGAAGATTTCTCAGGAGCACCCAACTGCCTGTCTTCGAGCTGGAGCTCTGATGGCTGTTCTTTCTTACTTGGACTTCTTCTCGACAGGAGTTCAGCGGGTGGCATTGTCTACTGCTGCAAATATGTGCAAGAAGCTTCCTCCTGATGCAGCTGACTTTGTGATGGAAGCTGTTCCACTTTTGACAAACCTCCTTCAGTACCACGACTCCAAGGTCCTGGAACATGCCTCTGTTTGTTTGACACGAATAGCTAAAGCGTTTGCATCATCTCCAGACAAATTAGATGAATTGTGCAATCATGGACTGGTAACACAAGCTGCCTCTCTCATTTCTACCAGCGGTTCTGGAGGTGGGCAGGCTTCTCTCAGCACCCCAACATATACTGGTTTGATCCGCCTTCTTTCCACATGTGCAAGTGGGTCTCCTCTTGGAGCTAAAACGTTGCTTCTCCATGGAGCTAGTGGCATACTTAAAGATATACTATCCGGTTCCGGTGTTTCTTCTAACACCTCTGTTTCGCCTGCATTGAGTAGGCCAGCGGATCAGATATTTGAGATTGTGAACCTGGCAAATGAACTTCTGCCTCCATTGCCTCAAGGAACCATTTCTCTTCCTGTCAGCTCCAACTTGTTTGTGAAAGAGTCTGTTGTGAAAAAATCTCCTCCTTCTGGGAATCCCGGGATACAAGAAGACACAAATGGAAATGTTCATGAAATATCAGCTCGTGCAAAATTATTAAATGATAAGCCTGAGTTACTTAAGCAATTTGGGATGGATCTCCTCCCAGTTTTAATGCAGATATATGGTGCTAGCGTCAATGGTCCAGTTCGGCACAAATGTCTTTCTGTCATTGGAAAATTGATGTATTTCAGCACAGCTGAGATGATCCAGTCTTTGTTGAGTGTAACAAATATATCAAGTTTCTTAGCTGGTGTGTTAGCATGGAAAGATCCACATGTTTTGGTTCCTGCCTTGCAAATTTCAGAAATTCTTATGGAAAAGCTTCCTGGAATTTTCTCTAAAATGTTTGTCAGAGAAGGTGTGGTTCATGCAGTTGACCAACTTATTTTGGCTGGAAATGCAACTAATATATCTACACAAACATCATCTGCTGAGAAGGATACTGATTCTGTATCTGGAACTTCATCTCGCTCTAGACGCTATCGCCTGCGCAGTGGTAATTCAAATCCCGATGCGAACCGTTCGGATGATTTGAAGAGTCCAGTTCCAGTAAATGTTGGTTTGCCACCAAGTTCTGTGGAAACTCCAACAACTAATTCTAGTATCCGTGCATCCATTAGCTCAGTTGCTAATGCTTTTAAAGACAAGTACTTTCCTTCTGATCCTGGGTCTGTTGAAGTGGGTGTTAGTGATGATCTTTTGCATCTGAAAAATCTATGCTCGAAGTTGAACACTGGTGTTGATGACCAAAGAAGTAAGGCCAAGGGAAAAGTTGAAGCTTCTGGATTTGATCTGGATGATGATTCTACTAACACAGAAGAGTATTTGATTGGGGTGATATCTGACATGCTAAAGGAACTTGGCAAAGGAGATAGTGTATCTACTTTTGAATTTATCGGTAGTGGTGTTGTTGAAGCCTTGCTAAATTATTTTTCTTGTGGGTATTTCTCTAAAGATCGAATATCAGAAACCAATCTCCCCAAGCTTCGCCAACAGGCACTTACAAGGTTCAAGTCATTTGTTGCTGTTGCATTACCTTTGAGCATTGACAATGGGGCTGTTGCTCCTATGACTGTCTTGGTTCAGAAGCTTCAAAATGTGTTGTCCTCCTTGGAGCGTTTCCCTGTAATGCTGAGTAATTCATCTCGGTCATCTAGTGGAAGTGGACGTCTCTCCTCTGGGCTAAGTGCATTATCTCAGCCCATAAAATTACGTTTCTGTCGAGCCCAGGGTGAAAAGTCACTTAAGGATTATTCATCCAGTGTGGTACTGATTGATCCGTTAGCAAGTCTAGCAGCCATCGAGGAATTTCTATGGGCTCGTGTCCAGCGTGGTGAATCTGGTCTAAAGTCTACTGTAGGCACTGAAAATTCTGAATCTGGAACAACTCCTGCAGGGGCTGGTGTTTCATCTCCTTCCTCTTATATTCCCTCCACTGCCTTTCGTTATTCAACCGGATCCAGATCCAGATCATCTGTTAATATAGGAGATACACCTAGAAAAGAAATATTTCAAGACAATGGCACGAGCTCATCTAAGAGCAAGGGTAAAGCTGTATTAAAACCTGCGCAGGAGGAAGCACGGGGACCCCAAACAAGGAATGCAGTGCGCAGAAGAGCAGCTCTAGATAAAGACGCTCAAATGAAACCTGCAAATGGCGACTCAACTTCTGAGGATGAAGAATTGGATATATCTCCTGTTGAAATTGATGAGGCTTTGGTGATTGAAGATGATGATATTTCTGATGATGAGGATgaagaccgtgaagatGTACGGAGGGATTATTATCTTCCTGTCTACTTGCCTGACGAAGTGCATGATGTGAAATTGGGTGACTCAGCTGAGGAGAGTACTGTTGCTCCTGCAACAAGTGATAGCCAGACTAATGCAGCTTCAGGTTCTAGCAGCAAAGCGGGTACAGCCAGGGGTTGTGACTCTGCTGATTTTAGGAGTGGGTATTCATCTAGCTCAAGGGGTGCAATGTCATTTGCTGCTGCTGCTATGGCTGGACTTGGATATGCTAATAGCAGAGGTTTCAGGGGTGGCAGAGATAGGCATGGGCGCCTGTTGTTTGGTAGTTCTAATGATCCTCCAAAGTTGATTTTTACTGCTGGTGGGAAGCATCTTAATAGGAATTTGACTATATATCAGGCAATTCAAAGACAGCTCATGCTAGATGAAGATGATGATGAGAGACTTGCTGGCAGTGACCGTGTATCTAGTGATGGAAGCAGCCTGTGGGGTGATATTTACACCATCACTTATCAAAGGGCAGAAAACCAGCCAGATAAGGCATCCAATGGTGGATCAAGTTCAAATACTTCAAAATCTGCCAAATCTGGGTCTGCATTAAATTCCAGCTCAGAAGCTAAATTGCATCAGACATCTGTTCTAGACAGTATATTGCAGGGAGACTTGCCATGTGATCTAGAGAAATCTAATCCTACCTACAATATTTTGGCACTCCTGCGTGTGCTGGAGGGTTTGAACCAGCTTGCGCCTCATTTGAGGACCCAAATGGTTTCTGATAGCTTCGCCAAGGGAAAAATCTTGGATTTAGATGAGCTAGGTGTTACAACTGGTGCTAGGGTGCTTCCAGAGGAATTTGTGAGTGGTAAGCTTACTCCAAAATTGGCTAGGCAAATACAAGATGCCCTTGCACTATGCAGTGGTAGTCTTCCCTTATGGTGTTGCCAGTTGACTAAAGCATGCCCTTTCTTGTTTCCTTTTGACACCCGACGACAGTACTTTTATTCTACCGCATTTGGGTTATCTCGTGCATTGTATCGACTTCAGCAGCAGCAAGGCGCTGATGGTCATGGATCAACAACTGAGAGGGAGGTGAGAGTTGGGAGATTGCAGCGCCAAAAGGTTCGTGTCTCTCGAAATCGTGTCTTGGATTCTGCTGCAAAAGTTATGGGGATGTATTCTAGCCAAAAAGCTGTACTTGAAGTAGAATATTTTGGTGAAGTTGGGACTGGCCTGGGTCCCACCCTTGAGTTTTATACAATTCTAAGTCATGATTTGCAACAAGTTGGATTGCAAATGTGGAGATCTTATTCTTCAGAAAAACATCAAATGGAAATTGATAGAGATGAAAAGAAAAAGAAAAGTGATGGCTCTGGGCCTAATTTGGCTGGAGATGGAGAACTTGTTGAAGCTCCTCTGGGGTTGTTTCCTCGGCCTTGGCCTACAAATTCTGATGCATCAGAGGGTAGCCGGTTTTCAAAAGTCGTTGAGTATTTCCGGCTGCTAGGTCGTGTTATGGCTAAAGCTCTTCAAGACGGACGACTTTTGGACCTGCCATTGTCAGTGGCATTTTATAAGCTTGTTCTCGGCCAAGATCTTGATTTGCATGACATTCTGTCCATTGATGCTGAGCTTGGGAAGACTTTGCAAGAGTTCAATGCCCTTGTTTGTCGGAAACATTATATAGAATCTATTGGTGGTAGCTATACAGATACAATTGTTAACTTGCATTTTCATGGGGTGCCAATCGAAGATCTTTGCTTAGATTTTACACTCCCTGGTTATCCTGAATACACCTTGAAGCCAGGAGATGAAATTGTTGATATCAACAATTTGGAGGAGTATATATCCTTGGTGGCAGATGCAACTGTCAAGACTGGAATCATGCGGCAAATAGAAGCATTTAGAGCAGGGTTTAACCAGGTTTTTGACATCTCGTCTTTACAAATTTTTACTCCTCAAGAACTAGATAATTTGCTTTGCGGCTGCAGGGAGTTGTGGGAGTCTGAGACACTTGCTGATCATATAAAATTCGACCATGGGTACAATGCAAAGAGCCCTGCCATTATTAATTTACTTGAAATTATGGGAGGGTTCACACCAGAGCAGCAACGTGCCTTCTGTCAATTTGTTACTGGTGCACCTAGGCTGCCACCTGGAGGGCTGGCAGTTCTAAATCCAAAACTAACGATTGTGAGGAAGCTTTCGTCAACCGCAGTTAATACTTCATCTAATGGGAATGGACCTTCAGAATCAGCAGATGATGACTTGCCTAGTGTGATGACATGTGCTAATTACCTGAAACTTCCTCCTTACTCTACCAAGGAAATTATGTACAAGAAGCTACTCTATGCAATCAACGAGGGCCGGGGATCCTTTGATTTATCATGA 5691 0.4453 METRSRKRAEASSAAPSSSSSTTTTTASRSAKCSRLSSSSSSIPNTTTANTRSRSARNNNNNSVSPMDPTNESSGSRRDRRGKNFDRDNSDKGKEKEHDVRIRDAERERALALNLEAEDVGDDDDDNDSEGGVGILHQNLISASTFRGLLRKLGAGLDDLLPATAMGGSVPSSHQTGGLKQILSGLRADGEEGRQVEALTHLCDMLSIGTEDSLSTFSVDSFVPVLVGLLNHESNPDVMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPPDAADFVMEAVPLLTNLLQYHDSKVLEHASVCLTRIAKAFASSPDKLDELCNHGLVTQAASLISTSGSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKTLLLHGASGILKDILSGSGVSSNTSVSPALSRPADQIFEIVNLANELLPPLPQGTISLPVSSNLFVKESVVKKSPPSGNPGIQEDTNGNVHEISARAKLLNDKPELLKQFGMDLLPVLMQIYGASVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISSFLAGVLAWKDPHVLVPALQISEILMEKLPGIFSKMFVREGVVHAVDQLILAGNATNISTQTSSAEKDTDSVSGTSSRSRRYRLRSGNSNPDANRSDDLKSPVPVNVGLPPSSVETPTTNSSIRASISSVANAFKDKYFPSDPGSVEVGVSDDLLHLKNLCSKLNTGVDDQRSKAKGKVEASGFDLDDDSTNTEEYLIGVISDMLKELGKGDSVSTFEFIGSGVVEALLNYFSCGYFSKDRISETNLPKLRQQALTRFKSFVAVALPLSIDNGAVAPMTVLVQKLQNVLSSLERFPVMLSNSSRSSSGSGRLSSGLSALSQPIKLRFCRAQGEKSLKDYSSSVVLIDPLASLAAIEEFLWARVQRGESGLKSTVGTENSESGTTPAGAGVSSPSSYIPSTAFRYSTGSRSRSSVNIGDTPRKEIFQDNGTSSSKSKGKAVLKPAQEEARGPQTRNAVRRRAALDKDAQMKPANGDSTSEDEELDISPVEIDEALVIEDDDISDDEDEDREDVRRDYYLPVYLPDEVHDVKLGDSAEESTVAPATSDSQTNAASGSSSKAGTARGCDSADFRSGYSSSSRGAMSFAAAAMAGLGYANSRGFRGGRDRHGRLLFGSSNDPPKLIFTAGGKHLNRNLTIYQAIQRQLMLDEDDDERLAGSDRVSSDGSSLWGDIYTITYQRAENQPDKASNGGSSSNTSKSAKSGSALNSSSEAKLHQTSVLDSILQGDLPCDLEKSNPTYNILALLRVLEGLNQLAPHLRTQMVSDSFAKGKILDLDELGVTTGARVLPEEFVSGKLTPKLARQIQDALALCSGSLPLWCCQLTKACPFLFPFDTRRQYFYSTAFGLSRALYRLQQQQGADGHGSTTEREVRVGRLQRQKVRVSRNRVLDSAAKVMGMYSSQKAVLEVEYFGEVGTGLGPTLEFYTILSHDLQQVGLQMWRSYSSEKHQMEIDRDEKKKKSDGSGPNLAGDGELVEAPLGLFPRPWPTNSDASEGSRFSKVVEYFRLLGRVMAKALQDGRLLDLPLSVAFYKLVLGQDLDLHDILSIDAELGKTLQEFNALVCRKHYIESIGGSYTDTIVNLHFHGVPIEDLCLDFTLPGYPEYTLKPGDEIVDINNLEEYISLVADATVKTGIMRQIEAFRAGFNQVFDISSLQIFTPQELDNLLCGCRELWESETLADHIKFDHGYNAKSPAIINLLEIMGGFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTAVNTSSNGNGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGRGSFDLS 1896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00036 1896 Pfam HECT-domain (ubiquitin-transferase) 1522 1896 IPR000569 GO:0004842
Gma06g00036 1896 Gene3D - 171 659 IPR011989 -
Gma06g00036 1896 Gene3D Hect, E3 ligase catalytic domains 1414 1658 - -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 656 692 - -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 966 1034 - -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 656 717 - -
Gma06g00036 1896 SUPERFAMILY ARM repeat 178 647 IPR016024 -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 1134 1158 - -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 1542 1558 - -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 1130 1162 - -
Gma06g00036 1896 SMART arm_5 337 375 IPR000225 GO:0005515
Gma06g00036 1896 SMART arm_5 294 334 IPR000225 GO:0005515
Gma06g00036 1896 SMART arm_5 210 251 IPR000225 GO:0005515
Gma06g00036 1896 MobiDBLite consensus disorder prediction 73 103 - -
Gma06g00036 1896 SUPERFAMILY Hect, E3 ligase catalytic domain 1465 1889 IPR035983 GO:0004842
Gma06g00036 1896 Gene3D Hect, E3 ligase catalytic domain 1767 1894 - -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 1074 1106 - -
Gma06g00036 1896 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 49 1896 IPR045322 GO:0006511|GO:0061630
Gma06g00036 1896 ProSiteProfiles HECT domain profile. 1596 1896 IPR000569 GO:0004842
Gma06g00036 1896 SMART hect_3 1484 1896 IPR000569 GO:0004842
Gma06g00036 1896 MobiDBLite consensus disorder prediction 1542 1567 - -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 10 72 - -
Gma06g00036 1896 CDD HECTc 1473 1891 IPR000569 GO:0004842
Gma06g00036 1896 MobiDBLite consensus disorder prediction 1048 1062 - -
Gma06g00036 1896 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 49 1896 - -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 966 1112 - -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 1275 1303 - -
Gma06g00036 1896 MobiDBLite consensus disorder prediction 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00036 Gma-Chr6 313201 322500 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00036 K10590 - gmx:100818972 3429.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00036 06 313201 322500 Gma06g00036 06 313201 322500 ECH
Gma04g00040 04 336301 346162 Gma06g00036 06 313201 322500 ECH
Gma04g00040 04 336301 346162 Gma06g00036 06 313201 322500 GST