Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00007 ATGGAGAAGAGGGTAGCAATATTACAGGAATGGTTTGACCGCGTTGACTCGGAGAAAAGTGGAAGCATAACAGCGGTGCAGCTAAAGACAGCTCTTGCTGTGGGCAACCTGGAATTTCCGCTCTCAGTGGTTCAGCAAATGATCAGGATGTACGATTTCGACCGGAATGGTACTATGAGCTTTCAAGAATTTGTTTCACTCAACAACTTCCTTCTTAAGGTTCAACATGCATTTTCTGATCTAGAGAGGGGTCGTGGTTTTCTTGTACCTGATGATGTATTTGAGGCTTTGGTAAAAATTGGTTTCATGCTGGATTCTCCTGCTTTTTACTCTGTCTGTGAGAGCTTCGATCAAAGTGAAAATGGGAGGTTTCAGCTGGACAACTTAATATCAATCTGTATATTCTTACAATCAGCACGGAACCTGTTTAATTCATTTGATACAGCAAAACAAGGCAGAGTTACTCTCGATCTGAATCAATTTGTCTATTGTACTGCCAATTGCAGAATATGA 513 0.4113 MEKRVAILQEWFDRVDSEKSGSITAVQLKTALAVGNLEFPLSVVQQMIRMYDFDRNGTMSFQEFVSLNNFLLKVQHAFSDLERGRGFLVPDDVFEALVKIGFMLDSPAFYSVCESFDQSENGRFQLDNLISICIFLQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00007 170 PANTHER PEFLIN 7 166 - -
Gma06g00007 170 Gene3D - 1 168 - -
Gma06g00007 170 SMART efh_1 43 71 IPR002048 GO:0005509
Gma06g00007 170 SMART efh_1 7 35 IPR002048 GO:0005509
Gma06g00007 170 ProSiteProfiles EF-hand calcium-binding domain profile. 3 38 IPR002048 GO:0005509
Gma06g00007 170 SUPERFAMILY EF-hand 5 166 IPR011992 -
Gma06g00007 170 ProSiteProfiles EF-hand calcium-binding domain profile. 39 74 IPR002048 GO:0005509
Gma06g00007 170 ProSitePatterns EF-hand calcium-binding domain. 52 64 IPR018247 -
Gma06g00007 170 Pfam EF hand 44 66 IPR002048 GO:0005509
Gma06g00007 170 PANTHER PEFLIN 7 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00007 Gma-Chr6 98251 101504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00007 2 132 EF-hand Containing Proteins AT5G04870 25.362 3.15e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00007 - - gmx:100814189 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00007 06 98251 101504 Gma06g00007 06 98251 101504 ECH
Gma04g00010 04 109570 114381 Gma06g00007 06 98251 101504 GST