Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00010 ATGGAGAACAGGGTAATATTACAGGAATGGTTTGACCGCGTTGACTCGGAGAAAAGTGGAAGCATAACAGCGGTACAGCTGAAGACTGCTCTTGCTGTGGGCAACCTGGAATTTCCGCTCTCAGTTGTTCAGCAAATGATCAGGATGTACGATTTCGACAGGAATGGTACTATGAGCTTTCAAGAATTTGTTGCACTCAACAACTTCCTTCTTAAGGTTCAACATGCATTTTCTGATCTAGAGAGGGGTCGTGGTTTTCTTGTACCTGATGATGTATTTGAGGCTTTGGGAAAAATTGGTTTCATGCTGGATTCTCCTGCTTTTTACTCTGTCTGCGAGAGCTTTGATCAAAGTAAAAATGGGAGGTTTCGGCTGGATGACTTAATATCAATCTGTATATTCTTACAATCAGCACGGAACCTATTTAATTCATTTGATACAGCTAAACAAGGCAGAGTTACTCTCGATCTGAATCAATTTGTCTATTGTACTGCCAATTGCAGAATATGA 510 0.4078 MENRVILQEWFDRVDSEKSGSITAVQLKTALAVGNLEFPLSVVQQMIRMYDFDRNGTMSFQEFVALNNFLLKVQHAFSDLERGRGFLVPDDVFEALGKIGFMLDSPAFYSVCESFDQSKNGRFRLDDLISICIFLQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00010 169 ProSiteProfiles EF-hand calcium-binding domain profile. 2 37 IPR002048 GO:0005509
Gma04g00010 169 Pfam EF hand 43 65 IPR002048 GO:0005509
Gma04g00010 169 PANTHER PEFLIN 6 165 - -
Gma04g00010 169 SUPERFAMILY EF-hand 6 165 IPR011992 -
Gma04g00010 169 Gene3D - 1 167 - -
Gma04g00010 169 PANTHER PEFLIN 6 165 - -
Gma04g00010 169 SMART efh_1 42 70 IPR002048 GO:0005509
Gma04g00010 169 SMART efh_1 6 34 IPR002048 GO:0005509
Gma04g00010 169 ProSiteProfiles EF-hand calcium-binding domain profile. 38 73 IPR002048 GO:0005509
Gma04g00010 169 ProSitePatterns EF-hand calcium-binding domain. 51 63 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00010 Gma-Chr4 109570 114381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00010 7 131 EF-hand Containing Proteins AT5G04870 25.758 1.29e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00010 - - gmx:100792880 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00010 04 109570 114381 Gma04g00010 04 109570 114381 ECH
Gma04g00010 04 109570 114381 Gma06g00007 06 98251 101504 GST