Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02385 ATGGCGAAGAACCTATTGGTTTTGTTGGGGCTGGGTTTAGCTGGAATAGTTCTCATCACCAGAAAGCTCAATAAGTCCGTCAGAGAGGATTTCGGCGCTTTCATTCATAAGCTTCAGCTGCTTCCTCCTCCCCAGCCTTCTCCTCCCAAGGCTCCTCATCCCCTCACCTCACTCACCTTCGCACTTTCCGACCTATTTCACATCCATGGACACGTGCCCTCGTTCGGGCATCCTGACTGGGCTAGGACTCACGAACCCTCTTCTTCCACTGCTCCCGCTGTTTCCGCTCTCGTCGAGGGCGGTGCAACCTGCGTTGCAACTACTGTTCTCGACGACTTAGCTCTAGGTATTGGCGGTGAAAATAAGCATTTTGGAACGCCTACTAATCCTGCTGTTCCTGCTCGAGTACCGGGTGGCTCCTCAAGTGGTGCTGCTGTCGCCGTTGCTGCCAATTTCGTTGACTTTGCATTGGGTATTGATACAACTGGCGGGGTGAGAGTACCTGCTGGATTTTGTGGCATTCTAGGATTTCGACCTTCACATGGTGCTGTTTCGCATATGGGAATCATACCTATTTCAACAAGTCTGGACACTGTTGgttggtttgcaaaggatcccaatatattgcgtcgtgttggccatatacttttacaagcaccatttgtaatgcaacgcagtcctcggcaaatagttatagctgatgattgttttcagcatataaatgttcctcttgacaggagttctcaagtggtggtcaaagccactgagaagctttttggaaggcaagtattgaagcatataaatcttggggactatttaagttctagagttccaagcttgaaggggtgctctggacagaaaccaaacggcgaagtgaaagcttcctcattaaaattacttgcccacattatgcaattcctacaaagGCATGAATTCAGACTTAAGCATGATGATTGGATGAACACGGTAAAACCTGATCTTCATCCTGGTGTTTCAGCACAATTGCATGAAAAATTTGAGGTATCTGATGCAGAGATTGAAAACTCTAAATCTGTTAGAAGTGAGATGCGTGCTGCTGTAAATTCGCTTTTGAAGGATGAAGGAATTTTGGTTATCCCCACGGTAGCTGATCCTCCTCCAAAATTAGGTGGGAAGGAGATCCTATCAGAGGATTATCAGAGCCGTGCATTTAGTCTGTTAAGTATTGCAAGCATATCAGGTTGTTGTCAGgtctcaataccattaggattttatgacaagtatcctgtttcagtgtccttgatagctaggcatggtggcgatcgatttttacttgacacattacagactgtgtatacaactctccaagaacaggctgatattgcttccAAAAGCAAATCATCTGGAAATGTTGTTAGTAAGGAGCAATCTGCTGAAATTGCCAAAGAGAAGGGAAACCAAGCCTATAAAGATAAGCAGTGGCAGAAAGCCATTGGATTTTATACAGAAGCTATCAAACTCTGTGGTGATAATGCAACATATTACAGTAACAGGGCTCAAGCGTATCTAGAACTTGAAAGTTATCTTCAAGCTGTGGAAGATTGTACAAAAGCAATTAGTCTTGACAAAAAGAATGTGAAGGCCTATTTTCGTAGAGGTACAGCTAGACAGATGCTAGGCTACTACAAGGAAGCAATTGATGATTTTAAACATGCCCTTGTACTTGAGCCAACCAACAAAAGGGCAGCTTCAGCTGCTGAAAGGTTGAGGAAGCTATTCCAGTAG 1764 0.3345 MAKNLLVLLGLGLAGIVLITRKLNKSVREDFGAFIHKLQLLPPPQPSPPKAPHPLTSLTFALSDLFHIHGHVPSFGHPDWARTHEPSSSTAPAVSALVEGGATCVATTVLDDLALGIGGENKHFGTPTNPAVPARVPGGSSSGAAVAVAANFVDFALGIDTTGGVRVPAGFCGILGFRPSHGAVSHMGIIPISTSLDTVGWFAKDPNILRRVGHILLQAPFVMQRSPRQIVIADDCFQHINVPLDRSSQVVVKATEKLFGRQVLKHINLGDYLSSRVPSLKGCSGQKPNGEVKASSLKLLAHIMQFLQRHEFRLKHDDWMNTVKPDLHPGVSAQLHEKFEVSDAEIENSKSVRSEMRAAVNSLLKDEGILVIPTVADPPPKLGGKEILSEDYQSRAFSLLSIASISGCCQVSIPLGFYDKYPVSVSLIARHGGDRFLLDTLQTVYTTLQEQADIASKSKSSGNVVSKEQSAEIAKEKGNQAYKDKQWQKAIGFYTEAIKLCGDNATYYSNRAQAYLELESYLQAVEDCTKAISLDKKNVKAYFRRGTARQMLGYYKEAIDDFKHALVLEPTNKRAASAAERLRKLFQ 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02385 587 PANTHER OUTER ENVELOPE PROTEIN 64, CHLOROPLASTIC 2 587 - -
Gma05g02385 587 Pfam Amidase 310 438 IPR023631 -
Gma05g02385 587 Pfam Amidase 52 205 IPR023631 -
Gma05g02385 587 Gene3D Tetratricopeptide repeat domain 443 587 IPR011990 GO:0005515
Gma05g02385 587 SMART tpr_5 539 572 IPR019734 GO:0005515
Gma05g02385 587 SMART tpr_5 505 538 IPR019734 GO:0005515
Gma05g02385 587 SMART tpr_5 471 504 IPR019734 GO:0005515
Gma05g02385 587 SUPERFAMILY TPR-like 469 576 IPR011990 GO:0005515
Gma05g02385 587 ProSiteProfiles TPR repeat profile. 505 538 IPR019734 GO:0005515
Gma05g02385 587 SUPERFAMILY Amidase signature (AS) enzymes 20 442 IPR036928 -
Gma05g02385 587 Pfam Tetratricopeptide repeat 540 572 IPR013105 -
Gma05g02385 587 ProSiteProfiles TPR repeat region circular profile. 539 572 - -
Gma05g02385 587 Pfam Tetratricopeptide repeat 505 538 IPR019734 GO:0005515
Gma05g02385 587 Gene3D Amidase signature (AS) domain 45 442 IPR036928 -
Gma05g02385 587 PANTHER AMIDASE 1 2 587 - -
Gma05g02385 587 ProSiteProfiles TPR repeat profile. 539 572 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02385 Gma-Chr5 44670063 44676396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02385 26 444 Acyl Lipid Metabolism Gene Families AT1G08980 49.645 7.31e-141 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02385 - - gmx:100776197 1102.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02385 05 44670063 44676396 Gma08g00520 08 4278185 4284808 GST