Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02117 ATGGAATCTGAGAGAGAAAGTTTTGACCTCTCAGGACCTTTGCATCTAACTTATGTCTTATGGGACAATGCATATCATCGAATGTCAGTTGCTGCTAGTTTGGTCCAAGGAGTTTACATTCTAGAAAGGGACAGGCAAGAAAAACGTGAAGGGCAAAATGCTCTTGCACCACCTTGGTGGACATTCTTTCACTTTAAGCTGCTCCGTCCCCTAGTAGATGATGTTGATTCCTCCATCTTTGGTGCAATATATGAGTTCAGGCCTCCATCATCTCAATATAATGACACTTTATATAGAAGTCCACATTATGTAATTGCCTTTAGAGGAACTCTAACCAAATCACATTCAGTTTCTCGTGATATTGAGCTGGATATCCACTTTATCAAGCAAGGGCTTCATCAAACTTCCCGCTCTGAAATAGCTATTCAAGCTGTTCAAAACACAGTAGCAACTGTAGGTGATTCAAATGTTTGGTTGGCTGGACACTCTCTAGGATCAGCAATGGCAATGCTCACTGGGAAAACCATGGCCAAGAATGGCATGTTTATCGAATCTTTTCTTTTCAACCCACCATTTGTATCTGCTCCAATTGAAAGAATTAAGGATGAGAGGGTGAAACATGGGATTCGAATTGCGGGCAGCGTGATAACAGCTGGACTCACCATTGCTATGCAAGCCAAGCAGCCGAAGGATTTATCTGTTGATCCATTTGCTGCTTTGGCTGCCTGGGTCCCAGGTTTGTTTGTGAATCCATCTGACCATATCTGCTCAGAGTATATTGGTTACTTTGAACATAGAAGAAAAATGGATGAGATTGGAGCAGGCGTCATTGAAAGGTTAGCAACTCAAAATTCACTTGGTGGCCTACTGATGAGTGCATTTGGGAAGGAATCTGAACCCCTTCACCTCATTCCTTCAGCTTCTCTGACAGTTAATGTTACTCCTTCGCGTGATTTCAAAGAAGCCCATGGGATTCACCAGTGGTGGAAACCAGACTTGCAGCTAGAACGCAAGCTCTACAATTACAAATAG 1032 0.4273 MESERESFDLSGPLHLTYVLWDNAYHRMSVAASLVQGVYILERDRQEKREGQNALAPPWWTFFHFKLLRPLVDDVDSSIFGAIYEFRPPSSQYNDTLYRSPHYVIAFRGTLTKSHSVSRDIELDIHFIKQGLHQTSRSEIAIQAVQNTVATVGDSNVWLAGHSLGSAMAMLTGKTMAKNGMFIESFLFNPPFVSAPIERIKDERVKHGIRIAGSVITAGLTIAMQAKQPKDLSVDPFAALAAWVPGLFVNPSDHICSEYIGYFEHRRKMDEIGAGVIERLATQNSLGGLLMSAFGKESEPLHLIPSASLTVNVTPSRDFKEAHGIHQWWKPDLQLERKLYNYK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02117 343 PANTHER LIPASE CLASS 3-LIKE 3 342 - -
Gma05g02117 343 SUPERFAMILY alpha/beta-Hydrolases 18 203 IPR029058 -
Gma05g02117 343 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 342 - -
Gma05g02117 343 Pfam Lipase (class 3) 139 182 IPR002921 GO:0006629
Gma05g02117 343 Gene3D alpha/beta hydrolase 75 206 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02117 Gma-Chr5 42389078 42391935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02117 1 275 Acyl Lipid Metabolism Gene Families AT2G05260 57.544 6.06e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02117 - - gmx:100811139 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02117 05 42389078 42391935 Gma05g02117 05 42389078 42391935 ECH
Gma05g02117 05 42389078 42391935 Gma08g00223 08 1907704 1910093 GST
Gma01g02262 01 57786177 57796024 Gma05g02117 05 42389078 42391935 PCT
Gma11g00153 11 1177828 1179709 Gma05g02117 05 42389078 42391935 PCT