Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02262 ATGGAGAACCTAATTTCTTTGGTGAACAAAATCCAGAGGGCTTGCACCGCTTTGGGTGACCACGGCGAAGCAAGTGCCTTACCAACTCTCTGGGACTCTCTCCCTGCTATCGCCGTCGTCGGTGGCCAGAGCTCTGGAAAGTCCTCGGTGTTGGAAAGTGTTGTTGGCAAGGATTTCTTACCTCGTGGATCAGGGATTGTTACTCGGAGACCCCTTGTTTTGCAGCTTCACAAGATTGATGAGGGTGGCAGAGAGTATGCTGAATTTCTACACCTCCCCAGGAAAAGGTTCACCGATTTTGCTGCTGTGAGAAAAGAGATTCAAGATGAAACCGATAGAGAGACTGGACGAACAAGACAGATTTCAAGTGTTCCAATTCATCTTAGCATATATTCTCCGAATGTTGTTAACTTGACACTCATTGATCTCCCTGGCCTTACAAAGGTAGCTGTAGAGGGGCAACCAGATAGTATTGTCCAAGATATTGAGAATATGGTTCGCTCCTACATTGAGAAGCCAAACTGTATAATTTTGGCTATTACGCCTGCCAATCAAGATCTTGCAACATCTGATGCAATTAAAATATCCCGTGAAGTGGATCCCACTGGGGAAAGAACATTTGGAGTCTTGACAAAGATTGATCTTATGGACAAGGGTACTGATGCTGTTGAAATGTTGGAGGGGAGAGCTTATAGATTAAAGTATCCGTGGATCGGTGTTGTCAATAGATCACAAGCAGATATTAACAAGAATGTTGACATGATTGCTGCTAGGCGTAGAGAACATGAATATTTTTCTAATACCCCTGAATATAAGCACCTTGCTCACAGAATGGGTTCTGAGCATCTAGCAAAGATGCTTTCGAAGCATTTGGAGGCAGTAATCAAGTCCAAAATTCCTGGTATCCAATCTCTTATCAGTAAAACAATTGCTGAACTTGAAGCTGAACTGAGTCGTCTGGGAAAGCCTGTTGCAGCTGATGATGGGGGAAAGCTGTATGCAGTCATGGAAATATGCCGCTCATTTGATCATATATTCAAAGAACATCTTGATGGCGTGCGACCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTGCCTGCTGCTTTAAAAAGGCTGCAGTTTGATAAGCAGCTTTCGATGGAAAATATAAGGAAACTTATCACGGAAGCTGATGGGTATCAACCTCATCTAATAGCTCCCGAACAAGGATATCGTCGCCTCATTGAATCTTCTCTAACTACTGTCAGGGGTCCAGCTGAGGCAGCTGTTGATGTGGTTCATTCCCTATTAAAGGACCTAGTTCACAAAGCTATTAGCGAGACTCTGGACTTGAAGCAATATCCTGGTCTGCGTGTTGAGGTTGGGAATGCTGCCATTGATTCGCTAGAAAAAATGAGGGAGGAAAGCAAAAGAGCAACGCTACAACTAGTTGATATGGAGTGTGGCTATTTGACGGTTGATTACTTTCGGAAGCTTCCTCAAGATGTTGATAAGGGTGGCAATCCTACACATTCAATTTTTGATAGATATAATGATTCATATCTTAGGAGAATTGGAACCAATGTTCTGTCTTATGTCAATATGGTCTGTGCAAGTCTGCGGCATTCAATTCCCAAGTCAATTGTCTATTGTCAAGTGAGGGAAGCGAAACGAGGCCTACTAGATCACTTTTTCACTGAGCTAGGCAAAATTGAGCCCAAGCGTCTGTCCTCATTGCTGAATGAGGATCCTGCAATCATGGAAAGGCGAAGTGCCCTCTCAAAGAGGCTTGAGTTATACCGGAGTGCACAAGCTGAGATCGATGCAGTTGCATGCAACCTCAGTGATCGAAACAGTGACGTTTTTTTTTGCAACTTCCACCTAATATCAATCATCCACTTCGACTTTAAGATACTAAGAAGGAAGGAAGGCGGGGAAGTGAGAAGTGTAATGGCTTCTGAGAGGGAATGTTTTGACCTCTCTGGACCCTTACATTTAACTTATGTTGACTGGGATAATGCATATCATCGAAAGTCGGTTGCTGCTAGTTTGGTCCAAGGTGTTTATGTTCTAGAGAAGGACAGGCAAGAACGGCGTGAAGGTCCTGATGCTCTTGCACTGCCTTGGTGGGCGTTCTTCCACTTTAAGTTGTTTTGTTCGCTTGTCGATGATGTTGATTCTTCCATCTTTGGTGCTATTTATGAGTTCAAGCCTCCATCATCTATGTGCAATGACACCTTACATAGAAGTCCACGTTATGTAATTGCCTTCCGAGGGACTATAACCAAGGCAGACTCAGTTTCCCGTGATATCAAGTTGGGTATCCATTTTGTGCGAAATGGGCTTCATCAAACTTCACGTGCTGAGATAGCCATCCAAGCTGTTCGAAACATGGTGGCTACTGTGGGTGCTTCCAATATCTGGTTAGCTGGCCACTCGCTAGGATCAGCAATGGCAATGCTAACCGGGAAAACCATGGCCAAGACTGGCATATTTATTGAGTCTTTTCTCTTCAACCCTCCATATGTATCTGCTCCTATTGAGAGAATTAAGGACAAAAAATTGAAACATGGGCTTAGATTTGCTGGCAGTGTAGTAACAGCTGGACTTGCCATTGCTATGAAGGATAAGCAGAAGAAGAGTTTGTCCTTTGATCCATTTGCTGCTTTGTCTGCCTGGGTTCCATCCTTATTTGTGAATCCATCTGACCATATCTGCTCTGAGTATGTTGGATACTTTGAGCACAGAAGAAAAATGGAGGAGATTGGTGCAGGAAACATTGAAAAGTTAGCCACTCAAACTTCCCTTAATTGTCTACTGATGGGTGTGTTGGGGAAGGAATCTGATGAACCCCTGCACCTCATTCCTTCAGCTTCTCTGACAGTTAATCATACTCCTTCAAAGGATTTCAAAGAAGCTCATGGGATTCACCAATGGTGGAAACCTGACTTACGCCTAGAATCCAAGCTCTACCGATACTAA 2970 0.436 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIDEGGREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTRQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAITPANQDLATSDAIKISREVDPTGERTFGVLTKIDLMDKGTDAVEMLEGRAYRLKYPWIGVVNRSQADINKNVDMIAARRREHEYFSNTPEYKHLAHRMGSEHLAKMLSKHLEAVIKSKIPGIQSLISKTIAELEAELSRLGKPVAADDGGKLYAVMEICRSFDHIFKEHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLTTVRGPAEAAVDVVHSLLKDLVHKAISETLDLKQYPGLRVEVGNAAIDSLEKMREESKRATLQLVDMECGYLTVDYFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTNVLSYVNMVCASLRHSIPKSIVYCQVREAKRGLLDHFFTELGKIEPKRLSSLLNEDPAIMERRSALSKRLELYRSAQAEIDAVACNLSDRNSDVFFCNFHLISIIHFDFKILRRKEGGEVRSVMASERECFDLSGPLHLTYVDWDNAYHRKSVAASLVQGVYVLEKDRQERREGPDALALPWWAFFHFKLFCSLVDDVDSSIFGAIYEFKPPSSMCNDTLHRSPRYVIAFRGTITKADSVSRDIKLGIHFVRNGLHQTSRAEIAIQAVRNMVATVGASNIWLAGHSLGSAMAMLTGKTMAKTGIFIESFLFNPPYVSAPIERIKDKKLKHGLRFAGSVVTAGLAIAMKDKQKKSLSFDPFAALSAWVPSLFVNPSDHICSEYVGYFEHRRKMEEIGAGNIEKLATQTSLNCLLMGVLGKESDEPLHLIPSASLTVNHTPSKDFKEAHGIHQWWKPDLRLESKLYRY 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02262 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 308 IPR027417 -
Gma01g02262 989 CDD DLP_1 33 300 IPR001401 GO:0003924|GO:0005525
Gma01g02262 989 SMART dynamin_3 1 251 IPR001401 GO:0003924|GO:0005525
Gma01g02262 989 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 300 IPR030381 GO:0005525
Gma01g02262 989 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 608 - -
Gma01g02262 989 Gene3D alpha/beta hydrolase 716 852 IPR029058 -
Gma01g02262 989 Gene3D Dynamin, middle domain 333 586 - -
Gma01g02262 989 SUPERFAMILY alpha/beta-Hydrolases 664 846 IPR029058 -
Gma01g02262 989 PRINTS Dynamin signature 132 149 IPR022812 -
Gma01g02262 989 PRINTS Dynamin signature 182 200 IPR022812 -
Gma01g02262 989 PRINTS Dynamin signature 224 243 IPR022812 -
Gma01g02262 989 PRINTS Dynamin signature 59 76 IPR022812 -
Gma01g02262 989 PRINTS Dynamin signature 201 217 IPR022812 -
Gma01g02262 989 PRINTS Dynamin signature 34 52 IPR022812 -
Gma01g02262 989 Pfam Dynamin GTPase effector domain 514 606 IPR003130 GO:0003924|GO:0005525
Gma01g02262 989 SMART GED_2 513 606 IPR003130 GO:0003924|GO:0005525
Gma01g02262 989 Gene3D - 1 309 IPR027417 -
Gma01g02262 989 Pfam Dynamin family 37 213 IPR045063 -
Gma01g02262 989 ProSiteProfiles GED domain profile. 518 611 IPR020850 -
Gma01g02262 989 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Gma01g02262 989 PANTHER DYNAMIN 2 608 IPR022812 -
Gma01g02262 989 Pfam Dynamin central region 221 488 IPR000375 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02262 Gma-Chr1 57786177 57796024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02262 647 922 Acyl Lipid Metabolism Gene Families AT2G05260 58.537 1.23e-113 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02262 - - gmx:100819043 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02262 01 57786177 57796024 Gma01g02262 01 57786177 57796024 ECH
Gma01g02262 01 57786177 57796024 Gma11g00153 11 1177828 1179709 GST
Gma01g02262 01 57786177 57796024 Gma05g02117 05 42389078 42391935 PCT
Gma01g02262 01 57786177 57796024 Gma08g00223 08 1907704 1910093 PCT