Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02110 ATGGCAGAAAAGAGGTTCATCGTTGAGGTGGAGAAAGCCACAGAGGGCGGAGAAGGAAGGCCATCCATGGGCCCTGTCTACCGCAGCATTTTCGCCGACGATCTACTTCCTCCTCCCATTGAAGGTCTTAATACCTGCTGGGATATTTTCAGGATGTCTGTTGAGAAATACCCAGCAAGGAAAATGCTTGGTGTCCGTGAAATCGTGAATGGGAATCCTGGCAAGTACAAGTGGCAAACTTACAAAGAAGTGTATGACTTGGTGATGAATGTTGGCAATTCCATCCGTGCTTGTGGTTACGGGGAGGGTGTAAAATGTGGTATTTATGGTGCCAATTGCCCCGAATGGATTGTGAGCATGGAGGCCTGCAACGCTCATGGACTTTATTGTGTTCCCTTATATGATACCTTGGgtgccggggctgtggaatttattatatgccacgcagaggtctcaatggcttttgttgaagaaaagaagatacctgagctattgaagacatttcccaatgcaggaaaatatctcaagaCACTTGTGAGCTTTGGAAAGGTTACTCCTGAACAAAAGCAAGAAGTTGAAGAGTTTGGGTTAGCAATGTATTCATGGGATGAATTTTTGCAAGTGGGTCATAATCAGAGTTTTGATCTTCCTGTTAAAAAAAAAAGTGATGTGTGTACAATAATGTATACAAGTGGAACTACTGGTGATCCCAAGGGAGTTTTGATCTCCAATGAGAGCATTATTACACTCTTAGCTGGGATTCAGCAATTGCTGAAGAGTTGCAATGAAAAGTTGAATGAAAAAGATGTATACATATCATACCTTCCTCTTGCACATATCTTTGATAGGGTCATTGAGGAGGCAATGATAATGCATGGTGCCTCAATAGGTTTCTGGCGTGGAGATGTCAGACTGTTACTGGAAGATATTGGAGAGCTAAGGCCAACCATTTTCGTTGCAGTTCCCCGTGTGCTTGATAGAGTGTACAATGGTTTGACCCAAAAGATTTCTTCAGGGAGCTTTATGAAACAGACAATGTTCAATTTCGCATACTCATACAAGTTGCATAACATGACTAAAGGGCAAAATCATAATGAGGCATCTCCACTATTTGACAGAATTGTATTTAATAAGGTAAAACAAGGTTTAGGGGGTAATGTACGCATTATTTTGTCTGGAGCAGCACCTCTATCTAGACATGTGGAAGGTTTCCTACGGGTGGTGACTTGTGCTCATATCCTACAAGGATATGGTCTTACTGAAACCTGTGCTGGAACCTTTGTTTCATTACCAAATGAAAAGGACATGCTTGGTACGGTGGGGCCTCCTGTACCATATGTGGATGTGCGTCTTGAATCTATTCCTGAAATGGGATATGATGCACTTGCAACCACTCCAAGAGGAGAAATCTGTGTGAGGGGAAGTACTGTGTTTACCGGCTACTACAAACGTGAAGACCTCACCAAAGAGGTTATGATTGATGGATGGTTCCACACAGGGGATATTGGAGAGTGGCTACCCAATGGAACCATGAAAATTATTGATCGGAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAAAACCTGGAGAATATTTATGTTCAAGCTTCTTCTGTTGAATCTATATGGGTCTATGGAAACAGTTTTGAGTCATACCTCGTTGCTATTGTCAACCCCAGCAAGCAAGCACTTGATAAGTGGGCAGAAGAAAATGATATAACCGCGGACTTCAATTCTCTCTGTGAAGATTCTAGGACAAAAAGTTACATAATTGGAGAACTCACCAAGATTGCAAAGGATAAGAAGTTGAAAGGTTTTGAGTTTATTAAAGCTGTTCATCTTGACCCAGTTCCATTTGACATGGAACGTGGTCTTATGACTCCAACATTTAAGAAGAAGAGACCCGAATTGCTTAAATACTATCAGAATACCATTGACAACATGTACAAGACACAGAACACGCAGAACAAATCCAGTGCCTGA 1998 0.3924 MAEKRFIVEVEKATEGGEGRPSMGPVYRSIFADDLLPPPIEGLNTCWDIFRMSVEKYPARKMLGVREIVNGNPGKYKWQTYKEVYDLVMNVGNSIRACGYGEGVKCGIYGANCPEWIVSMEACNAHGLYCVPLYDTLGAGAVEFIICHAEVSMAFVEEKKIPELLKTFPNAGKYLKTLVSFGKVTPEQKQEVEEFGLAMYSWDEFLQVGHNQSFDLPVKKKSDVCTIMYTSGTTGDPKGVLISNESIITLLAGIQQLLKSCNEKLNEKDVYISYLPLAHIFDRVIEEAMIMHGASIGFWRGDVRLLLEDIGELRPTIFVAVPRVLDRVYNGLTQKISSGSFMKQTMFNFAYSYKLHNMTKGQNHNEASPLFDRIVFNKVKQGLGGNVRIILSGAAPLSRHVEGFLRVVTCAHILQGYGLTETCAGTFVSLPNEKDMLGTVGPPVPYVDVRLESIPEMGYDALATTPRGEICVRGSTVFTGYYKREDLTKEVMIDGWFHTGDIGEWLPNGTMKIIDRKKNIFKLSQGEYVAVENLENIYVQASSVESIWVYGNSFESYLVAIVNPSKQALDKWAEENDITADFNSLCEDSRTKSYIIGELTKIAKDKKLKGFEFIKAVHLDPVPFDMERGLMTPTFKKKRPELLKYYQNTIDNMYKTQNTQNKSSA 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02110 665 SUPERFAMILY Acetyl-CoA synthetase-like 41 661 - -
Gma05g02110 665 Pfam AMP-binding enzyme 56 524 IPR000873 -
Gma05g02110 665 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Gma05g02110 665 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Gma05g02110 665 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 656 - -
Gma05g02110 665 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 656 - -
Gma05g02110 665 Gene3D - 42 516 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02110 Gma-Chr5 42324654 42332661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02110 3 663 Acyl Lipid Metabolism Gene Families AT4G23850 71.256 0.0 1037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02110 K01897 - gmx:100811306 1355.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02110 05 42324654 42332661 Gma05g02110 05 42324654 42332661 ECH
Gma01g02254 01 57719964 57729222 Gma05g02110 05 42324654 42332661 PCT
Gma11g00162 11 1251371 1258493 Gma05g02110 05 42324654 42332661 PCT