Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02072 ATGAAGTGCAGATCGGTGGCGTGCATATGGTCCGGCACGCCCTTCCCTCACCGCGTTACCGCCGTCGCCGCTTTAACCGAACCTCCGACTCCCACCTTTTACACCGCCGGATCCGATGGCTCTGTCATCTGGTGGACCCTCTCCAATTCCACTTCCACTTCCCCACCGCAACTTAAGGCGGTGGGCGTGTTGTGCGGTCACGCCGCACCGATCACCGATCTCGCCGTTTGTAGTCCCGTCGCTGACGCAGAAAACGGTTACGGTCCAAGTGGAAGTAAGTTCAGTGCGTTGATTAGTGCGTGTTGCGATGGTTTTTTGTGTGTGTGGAGCAAAAACAGTGGTCATTGCCGGTGCAGGAGGAAATTGCCACCTTGGGTTGGCACTCCCCGCATAATTCGAACTTTGCCTTCAACGCCTAGATATGTGTGTATAGCGTGTTCTTTCGAGGCAAGTGAAGGAGTAATTGATAGAGAAACTAAGCCTAGGAAGCCTCCTAAGTGCACTATTCTTATCGTGGACTCGTATTCGCTTTCCATTACTCAGACCGTATTTCATGGAAGTCTATCCATTGGCCCAATTAGGTTTATGGCACTAGTGTTAGGTGATGACGAGAAGAGGAATTCGGTTTTCGTGGCTGATTCTGCTGGGAGGCAGCAGACGGTTTTGATATCGGAGGATCAAGGGGAAAGCTTGGCGAGTTCCCTTGGAGATAAAGGTCAATTGGAGAGTTCTTTTTGCTATGAGGGATTGAGTGGCGTGGAGCAAATTGTTTCGGTTTTAACGTATGGGAATGTTGTTGCTTTTATATTGAGAGATAGGTGTGTGTTTAGGTTGTTGAATGGTGATAGTGTGATTGGAGAGGTTTCTTTTTTGGACAGCCTATTATGTTTGGATCAGGGTTCTGCTCAAATGTATGCTATTGGTGGGATTTTTCTTGAAAGTGATTATGTGGGGAATATATGCAATGCCAATGAATATGGAAACTCGATTACAGTACAATTTGCTGTGTGGAATAATGTAGGTTATGCAGTTATATATAATGTGTTGTACCAGAATGATGTTTTTAAATGTGAACTTCATTCTGATATTCCTGGTACTCATTATCAACCTGATATGAGATTATCTGTCTTTTTCCTACAAGTAAATCAGCATCTTGTTTGTGTCAAGTCAGTTTGCCTTAATCATGAGGAGCCTTTACTATGGAGACCACTTGCCACAATCTGGTCGCTGCATGATTTTGATGATGAACCTGGTAGATTGTACCGTCAATGCAGAAGGATCAGTGATGGTATATCTTTCATCGACTGGTTTGATAATTCATCTCAGCTCAAGGGACTGGATGGGCTAGAGACTATGCCTACTTTTTGTGTGAGTCCAAGTTCTGATGATGTAGACAACACACATGTGGATAGCATGAGTAATTATTATGCTTACAAGGGGAAGGTTGTTTCTTCTTCCATGATTATCTCTGAGAACCTCTTTACTCCGTATGCTGTTGTATATGGTTTTTTAAGTGGAGAAATAGAGGTTGTAAGATTTGATCTGTTTCAAGGGATTAGCTTGGACAATGCAAGTTCCAATCCTGATGAAAAGTCAACTGCATGCAAACAGTGCTTCTCAGGACATACAGGTGCTGTACTTTGTTTGGCAGCGCATCAAAAGATGGGTAGTGCCAAAAGCTGGAACTTTAAACGGGTTTTGGTGTCTGGAAGTATGGATTGCACGATTCGTATATGGGATCTTGACACCGGCAGTCTTATCATGGTAATGCATCATCATGTGGCTCCTGTGCGTCAAATTATTCTTCCCCCATCTTTGACTGTGCATCCTTGGAGTGATTGCTTCCTTTCAGTTGGAGAGGATGCATGTGTTGCTCTTGTTTCTCTTGAGACTCTGCGAGTGGAGAGAATGTTTCCTGGACACATGAACTATCCTTCTAAAGTTTTATGGGATGGAGCAAGAGGTTATATTTCCTGTCTCTGTCAAACACATTACGGAACTTCTGATGCTACTGATATATTATGCATTTGGGATGTAAAGACAGGTTCACGCGAGCGAGTCCTGCGTGGGACAGCTGCACATTCAATGTTTGATCATTTTTGTAAAAGCATCAGCATGAATTCCATATCTGGCACATTGCTGAATGGAAATACATCAGTCTCTTCATTACTTCTTCCAATAGTTGATGATGCAAGGCTCTCTAACTCCCCCTTAAATCGGTTAGACAACTTGCTTACTTCAACAAGGTCGTCACCAAATATTCCAAATATGACTGAGCTGAATTCTTCCAAAACAAATGCAGGTAAAGGAAATCCAGTGAAGCCAAATTCATCCTCTCTGATTGGTCTTTTGAGTAGCAAGCTTCCTATCAAATGCTCTAGCCCATTCCCAGGGATTGTGTCTCTGTGTTTTGATCTTGCATCGTTGATGCTCTCTTATCCAAAGAATGAGTCCATGGAAAATGGTGGTGGCAAGCCAGTGAATATCAATATGAAGCAGCAGGGAGTTCAGGAGCAAAATCCCAGCTACCATAATCCAGAAACTGTAGAGGGGCATGACTTGGTTAGCCTATTTGAAGAATACTTACTTCGATATAGCTTGTCATTTCTACATTTGTGGAGTGTAGACAGGGAGCTTGATAATTTGCTGATAAGTGAAATGAAGCTGAGGAGACCAGAAAATTTTATAGTAGCTTCTGGTCTGCAGGGGGATAAAGGGTCATTGACATTGACGTTTCCTGCTCAGAGTGCTACTCTTCAGCTTTGGAAATCATCATCTGAATTTTGTGCAATGAGGTCATTGACGATGGTGTCCCTTGCCCAACGTTTGATTAGCTTGTCTCATTCTGGTTCTGCAGCCAGCAGTGCTTTAGCAGCCTTTTATACTCGGAATTTCCTGGAAAATTTTCCAGATGTGAAGCCACCTTCATTACAGCTCTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTGCGTATGGCTGCACGCTCTATATTTCATTGTGCTGCCTCTCATTGTATTCCTCTACCTCTATGCAATTCAAAACCTACCGAGTCAAACAATATGAGTTCCCAAACTGGAAGTAGAGACAAACATCTAGGAAATATGACAGAAGAAAGTATATCTCCTAAGGAAGAAAAGCAAGGAATTTCCCAAGATGAGGAATCCAAGATACTTGCTTGGTTAGAATCATTTGAAGTTCAAGATTGGAATTCTTGTGTTGGTGGAACAAGTCAGGATGCAATGACATCTCACATTATTGTTGCTGGTGCACTGGCTATCTGGTATCCTAGTCTTGTAAAACCAAGTCTTGCCATGCTAGTTGTTCATCCGTTAATGAAGTTGGCTATGGCCATGAATGAGAAATACAGCTCCACTGCTGCTGAGCTCCTTGCAGAGGGCATGGAAAGTACATGGAAAGAATGCATTGTCTCTGAGATTCCTCGTCTGATTGGGGATATTTTTTTCCAAGTAGAGTTGAGTGGTCCATCTTTAGTGAAAGAAATTTCAGATGCATCTTTTTCTATTAAGAAGACTTTGGTGGAGGTTCTTCTTCCAAGTTTAGCTATGGCTGATATACCAGGCTTTCTAACTGTGATTGAAAGCCAAATTTGGTCTACTGCATCTGATTCACCAGTTCACATGGTGTCCTTGTTGACTCTTATAAGGATCATGCGTGGTTCTCCAAAGAATTTGGCTCAATACCTTGACAAGGTGGTCAACTTCATTTTACAGACTATAGATCCAAGCAACTCAGTCATGCGGAAGACATGCTTTCAGAGTTCAATGACAACTTTAAAGGAAGTTGTACGTGTATATCCCATGGTGGCTGTCACTGATTCATGGACCAAACTAGCAGTTGGAGATGTGATTGGAGAAATTAACAATGCAGGCATTAGGGTTTATGATATGCAAAGTGTGACAATGGTAAAGGTTTTGGATGCAAGTGGGCCTCCTGGACTTCCAACTCTGCTCCCAGCAGCAACATCAGGAACAATGTTGACTACTGCAATTTCAGCACTGAGCTTTTCACCAGATGGAGAGGGGCTGGTTGCTTTTTCTGAAAATGGGCTACTGATTAGATGGTGGTCACTGGGATCTTTTTGGTGGGAGAAACTAAGCCGGAACTTTGTTCCTGTCCAGTGCACCAAACTAATATTTGTTCCTCCTTGGGAAGGATTTTCACCTAATTCATCAAGGTCAAGCATAATGGCCAATATTTTGGAAACTGACAGGCAGATGAACTTTCAGGATAATGTGAGGGATTCAAACCACGGGGACAGTCCGAAACACGCGCTTCATAGTTTGGACCTCTCCTATAGACTGGAATGGGTTGAGGGGCGGAAAGTACTTCTTACAAGGCATGGTCATCAATTGGGCACTTTTCAGTTATAG 4395 0.4312 MKCRSVACIWSGTPFPHRVTAVAALTEPPTPTFYTAGSDGSVIWWTLSNSTSTSPPQLKAVGVLCGHAAPITDLAVCSPVADAENGYGPSGSKFSALISACCDGFLCVWSKNSGHCRCRRKLPPWVGTPRIIRTLPSTPRYVCIACSFEASEGVIDRETKPRKPPKCTILIVDSYSLSITQTVFHGSLSIGPIRFMALVLGDDEKRNSVFVADSAGRQQTVLISEDQGESLASSLGDKGQLESSFCYEGLSGVEQIVSVLTYGNVVAFILRDRCVFRLLNGDSVIGEVSFLDSLLCLDQGSAQMYAIGGIFLESDYVGNICNANEYGNSITVQFAVWNNVGYAVIYNVLYQNDVFKCELHSDIPGTHYQPDMRLSVFFLQVNQHLVCVKSVCLNHEEPLLWRPLATIWSLHDFDDEPGRLYRQCRRISDGISFIDWFDNSSQLKGLDGLETMPTFCVSPSSDDVDNTHVDSMSNYYAYKGKVVSSSMIISENLFTPYAVVYGFLSGEIEVVRFDLFQGISLDNASSNPDEKSTACKQCFSGHTGAVLCLAAHQKMGSAKSWNFKRVLVSGSMDCTIRIWDLDTGSLIMVMHHHVAPVRQIILPPSLTVHPWSDCFLSVGEDACVALVSLETLRVERMFPGHMNYPSKVLWDGARGYISCLCQTHYGTSDATDILCIWDVKTGSRERVLRGTAAHSMFDHFCKSISMNSISGTLLNGNTSVSSLLLPIVDDARLSNSPLNRLDNLLTSTRSSPNIPNMTELNSSKTNAGKGNPVKPNSSSLIGLLSSKLPIKCSSPFPGIVSLCFDLASLMLSYPKNESMENGGGKPVNINMKQQGVQEQNPSYHNPETVEGHDLVSLFEEYLLRYSLSFLHLWSVDRELDNLLISEMKLRRPENFIVASGLQGDKGSLTLTFPAQSATLQLWKSSSEFCAMRSLTMVSLAQRLISLSHSGSAASSALAAFYTRNFLENFPDVKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHCIPLPLCNSKPTESNNMSSQTGSRDKHLGNMTEESISPKEEKQGISQDEESKILAWLESFEVQDWNSCVGGTSQDAMTSHIIVAGALAIWYPSLVKPSLAMLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKECIVSEIPRLIGDIFFQVELSGPSLVKEISDASFSIKKTLVEVLLPSLAMADIPGFLTVIESQIWSTASDSPVHMVSLLTLIRIMRGSPKNLAQYLDKVVNFILQTIDPSNSVMRKTCFQSSMTTLKEVVRVYPMVAVTDSWTKLAVGDVIGEINNAGIRVYDMQSVTMVKVLDASGPPGLPTLLPAATSGTMLTTAISALSFSPDGEGLVAFSENGLLIRWWSLGSFWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIMANILETDRQMNFQDNVRDSNHGDSPKHALHSLDLSYRLEWVEGRKVLLTRHGHQLGTFQL 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02072 1464 SMART WD40_4 57 110 IPR001680 GO:0005515
Gma05g02072 1464 SMART WD40_4 583 628 IPR001680 GO:0005515
Gma05g02072 1464 SMART WD40_4 1330 1364 IPR001680 GO:0005515
Gma05g02072 1464 SMART WD40_4 532 580 IPR001680 GO:0005515
Gma05g02072 1464 SMART WD40_4 5 46 IPR001680 GO:0005515
Gma05g02072 1464 SUPERFAMILY ARM repeat 793 1260 IPR016024 -
Gma05g02072 1464 MobiDBLite consensus disorder prediction 1032 1049 - -
Gma05g02072 1464 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1464 - -
Gma05g02072 1464 ProSitePatterns Trp-Asp (WD) repeats signature. 567 581 IPR019775 -
Gma05g02072 1464 SUPERFAMILY WD40 repeat-like 20 690 IPR036322 GO:0005515
Gma05g02072 1464 ProSiteProfiles Trp-Asp (WD) repeats profile. 539 589 IPR001680 GO:0005515
Gma05g02072 1464 MobiDBLite consensus disorder prediction 746 772 - -
Gma05g02072 1464 Gene3D - 507 749 IPR015943 GO:0005515
Gma05g02072 1464 MobiDBLite consensus disorder prediction 1017 1049 - -
Gma05g02072 1464 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 539 585 - -
Gma05g02072 1464 MobiDBLite consensus disorder prediction 1017 1031 - -
Gma05g02072 1464 Gene3D - 2 147 IPR015943 GO:0005515
Gma05g02072 1464 Pfam WD domain, G-beta repeat 535 580 IPR001680 GO:0005515
Gma05g02072 1464 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02072 Gma-Chr5 41974489 41983735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02072 K24738 - gmx:100816646 2922.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02072 05 41974489 41983735 Gma05g02072 05 41974489 41983735 ECH
Gma05g02072 05 41974489 41983735 Gma08g00175 08 1515396 1525484 GST