Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02027 ATGGCCACCTCAAGCGCCAAATCAGTCCATGATTTCACCGTTAAAGATGCCAAGGGAAATGATATTAATCTTGGTGACTACAAAGGAAAGGTCCTTATCATTGTCAATGTTGCCTCACAATGTGGCTTGACTAATTCAAATTACACTGAGCTCAGTCAGTTGTATGAGAAATACAAACAGAAAGGTCTGGAAATTCTGGCATTTCCATGCAATCAGTTTGGGGCACAGGAGCCTGGATCTAATGAACAGATACAAGAGTTTGTTTGTACTCGCTTCAAGGCTGAGTTTCCCGTTTTTGACAAGGTTGATGTGAATGGTGACAAAGCTGCTCCACTGTACAAGTATCTAAAATCAAGCAAAGGTGGACTCTTTGGGGATGGTATCAAATGGAACTTCTCCAAGTTCCTTGTTGATAAAGAGGGAAATGTGGTTGATCGCTATGCACCCACAACTTCTCCTCTGAGCATTGAGAAGGACTTGCTGAAGTTGTTGGATGCATGA 501 0.4232 MATSSAKSVHDFTVKDAKGNDINLGDYKGKVLIIVNVASQCGLTNSNYTELSQLYEKYKQKGLEILAFPCNQFGAQEPGSNEQIQEFVCTRFKAEFPVFDKVDVNGDKAAPLYKYLKSSKGGLFGDGIKWNFSKFLVDKEGNVVDRYAPTTSPLSIEKDLLKLLDA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02027 166 CDD GSH_Peroxidase 8 160 IPR000889 GO:0004602|GO:0006979
Gma05g02027 166 ProSitePatterns Glutathione peroxidases active site. 29 44 IPR029759 -
Gma05g02027 166 PANTHER GLUTATHIONE PEROXIDASE 1 166 - -
Gma05g02027 166 ProSitePatterns Glutathione peroxidases signature 2. 66 73 IPR029760 -
Gma05g02027 166 ProSiteProfiles Glutathione peroxidase profile. 1 166 IPR000889 GO:0004602|GO:0006979
Gma05g02027 166 Gene3D Glutaredoxin 1 166 - -
Gma05g02027 166 PIRSF Glutathion_perox 1 166 IPR000889 GO:0004602|GO:0006979
Gma05g02027 166 ProSiteProfiles Thioredoxin domain profile. 3 166 IPR013766 -
Gma05g02027 166 PANTHER GLUTATHIONE PEROXIDASE 1 166 IPR000889 GO:0004602|GO:0006979
Gma05g02027 166 PRINTS Glutathione peroxidase family signature 27 44 IPR000889 GO:0004602|GO:0006979
Gma05g02027 166 PRINTS Glutathione peroxidase family signature 63 79 IPR000889 GO:0004602|GO:0006979
Gma05g02027 166 PRINTS Glutathione peroxidase family signature 128 137 IPR000889 GO:0004602|GO:0006979
Gma05g02027 166 Pfam Glutathione peroxidase 9 117 IPR000889 GO:0004602|GO:0006979
Gma05g02027 166 SUPERFAMILY Thioredoxin-like 8 165 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02027 Gma-Chr5 41560536 41563063 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02027 K00432 - gmx:100527421 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02027 05 41560536 41563063 Gma05g02027 05 41560536 41563063 ECH
Gma05g02027 05 41560536 41563063 Gma08g00132 08 1105099 1108051 GST
Gma01g02196 01 57211457 57212835 Gma05g02027 05 41560536 41563063 PCT
Gma11g00220 11 1743262 1744670 Gma05g02027 05 41560536 41563063 PCT