Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02196 ATGGCTAGCCAATCAAACACTAAATCAGTTCACGATTTCACAGTTAAAGATGCCAGGGGAAATAATGTTAATCTCGCCGATTACAAAGGAAAGGTCCTTCTCATTGTCAATGTTGCCTCACAATGCGGCTTGACTAATTCAAACTACACAGAGCTTAACCAATTGTATGAGAAATACAAAGGGAAAGGACTTGAAATTCTGGCATTCCCATGCAATCAGTTTGGGGCTCAGGAGCCAGGAACTAATGAAGAGATTGTGGAGTTTGCTTGTACTCGCTTCAAAGCTGAGTTTCCCATTTTCGACAAGGTGGATGTGAATGGTGACAATGCTGCTCCACTGTACAAGTTTCTGAAATCAAGCAAAGGTGGACTCTTTGGGGATAGTATCAAATGGAACTTCTCCAAATTCCTTGTTGATAAGGATGGGAATGTCGTTGACCGTTATGCACCCACAACTTCTCCTCTCAGCATTGAGAAAGACATAAAGAAGCTGCTAGATGCATGA 504 0.4206 MASQSNTKSVHDFTVKDARGNNVNLADYKGKVLLIVNVASQCGLTNSNYTELNQLYEKYKGKGLEILAFPCNQFGAQEPGTNEEIVEFACTRFKAEFPIFDKVDVNGDNAAPLYKFLKSSKGGLFGDSIKWNFSKFLVDKDGNVVDRYAPTTSPLSIEKDIKKLLDA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02196 167 ProSiteProfiles Thioredoxin domain profile. 4 167 IPR013766 -
Gma01g02196 167 PIRSF Glutathion_perox 1 167 IPR000889 GO:0004602|GO:0006979
Gma01g02196 167 Pfam Glutathione peroxidase 10 118 IPR000889 GO:0004602|GO:0006979
Gma01g02196 167 CDD GSH_Peroxidase 9 161 IPR000889 GO:0004602|GO:0006979
Gma01g02196 167 ProSiteProfiles Glutathione peroxidase profile. 1 167 IPR000889 GO:0004602|GO:0006979
Gma01g02196 167 Gene3D Glutaredoxin 1 167 - -
Gma01g02196 167 PANTHER GLUTATHIONE PEROXIDASE 1 166 IPR000889 GO:0004602|GO:0006979
Gma01g02196 167 ProSitePatterns Glutathione peroxidases active site. 30 45 IPR029759 -
Gma01g02196 167 ProSitePatterns Glutathione peroxidases signature 2. 67 74 IPR029760 -
Gma01g02196 167 PRINTS Glutathione peroxidase family signature 28 45 IPR000889 GO:0004602|GO:0006979
Gma01g02196 167 PRINTS Glutathione peroxidase family signature 64 80 IPR000889 GO:0004602|GO:0006979
Gma01g02196 167 PRINTS Glutathione peroxidase family signature 129 138 IPR000889 GO:0004602|GO:0006979
Gma01g02196 167 SUPERFAMILY Thioredoxin-like 9 166 IPR036249 -
Gma01g02196 167 PANTHER GLUTATHIONE PEROXIDASE 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02196 Gma-Chr1 57211457 57212835 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02196 K00432 - gmx:100306570 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02196 01 57211457 57212835 Gma01g02196 01 57211457 57212835 ECH
Gma01g02196 01 57211457 57212835 Gma11g00220 11 1743262 1744670 GST
Gma01g02196 01 57211457 57212835 Gma05g02027 05 41560536 41563063 PCT
Gma01g02196 01 57211457 57212835 Gma08g00132 08 1105099 1108051 PCT