Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01948 ATGCCAAGTCAACTTAAAGTTCACTTAGCTATCAGCCCTTTCGTTTTGCTTCACACAACAGCCGGCGATCGCCTTCGGATCTCTGAGAAAAGGAATTCAAAAAGAGGGTGTGAGAGACCTTTCACTATGGCAGACATTGGTGATTCTTCTTCCAAAGGGAAAAATGTATTGGAATCTCTTCCAAAAATTGAGCAATTAACTCAAGGTGTTGCTGATGTTAACATAGAGTCAGGACAAGATGATGGTGAATGGGTGGTATATGCAAAGAAGTCCAAGAATAGAGCCCGAAGCACAACTGTTAAACCATGGAGTCCTCCGGTTCATAATTCTAGACCCACTGGAAATACAAAGATGGCTCACAAGCCAGTTACTCGGAATGATGGAGGAGTTGGAAGGGCTTCTGGGAGTGGAAATCCTTGGCAGTCCCAAAATGCTAACTTCAAGAGACCTGCTGGCAGAGGAAATGGAAGGCCACAGTTAACTGCAAGTGAATCTGAAAGCAGCAATAATGTGACTTCTAATCCAGTCATTCGACCTCCCCTCGAGCATGGGTGGAATTGGCAATCTATATCTGGCTCCAAGCAGTCCAAGAGTGTTGATGATAGCCTGGTGAAGGGTGAAATTACAGAAGAGTCCCCTATGAAGAATGATAGTGTTGATGATGAAGGGGATGAAGAGGAAGGGTTTGATGCTATGGAAGATACGGATGATGATCTAATGAGTGATGATTATGATTCTGATACTAGTCAAAAGAGCCACGAGACTCGTAAGAAGAGCAAATGGTTTAAGGATTTCTTTGAGAACTTGGATGGCCTATCTATCGAAAAGATCAATGAACCGGAAAGGCAGTGGCACTGTACAGCTTGTCGAGGTGGTCCCGGTGCTATTGATTGGTACAGAGGACTGCAGCCTCTGATTACTCATGCCAAAACAAAGGGGTCAAAAAGGGTGAAGATCCATAGGGAGTTTGCTGAGCTTTTGGAAGAGGAACTGCGCAGAAGGGGCTCTGCAGTAATTCCACCTGGGGAAGTATTTGGTAAGTGGAAAGGTTTAAAAGATGAGGAGAAAGATCATGAAATAGTTTGGCCTCCGATGGTTGTCATTCAGAATACAAGGCTTGAACAGGATGAAAATGATAAGTGGCTAGGTATGGGTAACCAGGAGCTTCTTAATTATTTTAGCGCATATGATGCTGTGAAAGCTCGACACGCTTATGGCCCCCAGGGTCATCGGGGGTTGAGCGTTTTGATATTTGAAGCATCAGCTATAGGTTATCTTGAGGCTGAGCGTCTACACAAGCACTTTGCAGAACAAGGAACTGACCGAGATGCTTGGTTTAGTCACCACCGTAGATTATTTCTCCCTGGTGGCCGGCGACAGCTCTATGGATACATGGCAATAAAAGAAGACCTGGACTTTTTCAACAGACATTGCCAAGGTAAATCTAGACTCAAATATGACATGAGATCATACCAGGAGATGGTTGTAAACCAACTTCGGCAAATGAATGAGGACAACCAGCTGCTTATTTATTTGAAGGACAGGGATGCCAAAAAACAAAAACAAACAAAAGCTCTTGAAGAATCTTTGGGTATAGTGACTGAGAAGCTGCGAAGGACAATGGAAGAAAATCGCATTGTGAGGTTGAGAACTAAAATGCAGCATGAAGAGAACAAGGAAGAGATGTACATGCAAGAAGAATTTTTTAAGGAACAGATCAGAATCATTCATGATTCAAGGGCTGCAAAGGAAGAAGAGTTTGAGAGGATGCAGCAGGAGAAACGAGAGAAGGTGAAGCCGTCAAGTACTAGCCCTTTAAATGAAGAGGAAGGGAGAGTTAAGGTGGACGAATATCTAAAATTTGTTGAGTTTCAAGATAAAGAAATGGAAAACTTTGTTGCTGAAGAGGAGAAACTCCGTCAAGCTCATAAAGACAATGTTGATGCAATGACGCGGAGGCACTGGGAGGAAAAGGTGCAGTTGGAGGAAAGGTTTAATGAGGAGCTAGCCAAGCTCATGGAAAAGTATTCCCTATCTCACCCAGAAAAGTCCAATGGTATCTGA 2064 0.4351 MPSQLKVHLAISPFVLLHTTAGDRLRISEKRNSKRGCERPFTMADIGDSSSKGKNVLESLPKIEQLTQGVADVNIESGQDDGEWVVYAKKSKNRARSTTVKPWSPPVHNSRPTGNTKMAHKPVTRNDGGVGRASGSGNPWQSQNANFKRPAGRGNGRPQLTASESESSNNVTSNPVIRPPLEHGWNWQSISGSKQSKSVDDSLVKGEITEESPMKNDSVDDEGDEEEGFDAMEDTDDDLMSDDYDSDTSQKSHETRKKSKWFKDFFENLDGLSIEKINEPERQWHCTACRGGPGAIDWYRGLQPLITHAKTKGSKRVKIHREFAELLEEELRRRGSAVIPPGEVFGKWKGLKDEEKDHEIVWPPMVVIQNTRLEQDENDKWLGMGNQELLNYFSAYDAVKARHAYGPQGHRGLSVLIFEASAIGYLEAERLHKHFAEQGTDRDAWFSHHRRLFLPGGRRQLYGYMAIKEDLDFFNRHCQGKSRLKYDMRSYQEMVVNQLRQMNEDNQLLIYLKDRDAKKQKQTKALEESLGIVTEKLRRTMEENRIVRLRTKMQHEENKEEMYMQEEFFKEQIRIIHDSRAAKEEEFERMQQEKREKVKPSSTSPLNEEEGRVKVDEYLKFVEFQDKEMENFVAEEEKLRQAHKDNVDAMTRRHWEEKVQLEERFNEELAKLMEKYSLSHPEKSNGI 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01948 687 Coils Coil 539 566 - -
Gma05g01948 687 MobiDBLite consensus disorder prediction 217 243 - -
Gma05g01948 687 MobiDBLite consensus disorder prediction 92 253 - -
Gma05g01948 687 Gene3D XS domain 352 531 IPR038588 -
Gma05g01948 687 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 47 679 - -
Gma05g01948 687 Coils Coil 633 653 - -
Gma05g01948 687 Pfam XS zinc finger domain 286 324 IPR005381 GO:0031047
Gma05g01948 687 CDD RRM_like_XS 360 471 IPR005380 GO:0031047
Gma05g01948 687 MobiDBLite consensus disorder prediction 158 176 - -
Gma05g01948 687 Pfam XS domain 357 471 IPR005380 GO:0031047
Gma05g01948 687 MobiDBLite consensus disorder prediction 135 149 - -
Gma05g01948 687 MobiDBLite consensus disorder prediction 97 120 - -
Gma05g01948 687 MobiDBLite consensus disorder prediction 583 610 - -
Gma05g01948 687 MobiDBLite consensus disorder prediction 200 216 - -
Gma05g01948 687 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 47 679 IPR044287 GO:0031047|GO:0051607
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01948 Gma-Chr5 40873887 40878865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01948 - - gmx:100807738 1349.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01948 05 40873887 40878865 Gma05g01948 05 40873887 40878865 ECH
Gma05g01948 05 40873887 40878865 Gma08g00054 08 468342 469246 GST
Gma05g01948 05 40873887 40878865 Gma04g01971 04 50134659 50142557 PCT