Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01719 ATGATACTACTGAAGAAACACGAAATGGTCTTCAATTTTGTCTCTGCACTAATAACAACAATATTGCTCTCCGGAGCCATAGTTGAAGTTAAGGGTCTTCCACTTCACACGGATTCACGATGGATCGTCAACGAAGATGGGCAGAGGGTCAAGCTGGCATGTGTGAATTGGGTGTCCCATTTGGAAGCTGTGGTGGCCGAAGGGCTCAGCAAAAAGCCCGTGGATGTCATTTCAAATGGAATAAAGTCCATGGGCTTCAACTGTGTCAGGCTCACTTGGCCTATAGTTTTGGTCACTAATGACTCTCTTGCTTCTCTCACCGTTAGAAGCTCCTTTCAGAACCTTGCCCTCCTTGAATCCATTGCTGGTGTCCAAACCAACAACCCCTCCATTATCGATCTTCCCCTCATCCAAGCTTTTCAGGCAGTGGTGAAAAGTCTCGGTGACAACGATGTGATGGTGATATTGGACAACCACATAACCCAGCCAGGGTGGTGCTGCAGTAACTCCGACGGCAATGGCTTCTTCGGTGACAAATTTTTTGACCCAAACCAGTGGATATTGGGCCTCACCAAGATGGCCTCCCTCTTCAATGGAGTCACTAATGTGGTGGGCATGAGCTTGAGGAATGAGCTCCGAGGGCCCAAACAGAATGTCAACGATTGGTACAAGTACATGGTGAAAGGAGCAGAAGCGATTCATGCAGCAAATCCGGATGTTCTTGTTATTTTATCCGGCCTGAATTTTGATAAAGACTTATCTTTCATTCAAAATCGGCCAGTGAGCCTCACATTTAAGGGGAAATTAGTATATGAGGCACACTGGTATGCCTTCACTGATGGTCAAGCTTGGGTTAATGGGAATCCAAACCAAGTATGTGGACAAGTGGCAGGAAATATGATGAGAACCTCAGGCTTTTTAGTGAACCAAGGATGGCCATTGTTTATTAGTGAGTTTGGTGGAGACTTGAGAGGTACCAACGTGAATGACAACCGCTACCTTAACTGCTTCTTGGCAGTGGCAGCTGAGCTTGACTTGGATTGGGCCTTGTGGACACTTGTTGGTAGCTACtactttagacaaggagttataggaatggaagagttttatgggattcttagttgggactggacccaagttagaaataccactttcttaaacagaatctctgccctccaacttccatttcgagGTCCAGGAATAACAAGAGGCAATCCATACAAATTGATATTCCATCCTTTGACCGGTTTGTGTGTCATAAGAAAGTCATTACTAGACCCATTGACATTGGGTCCTTGCTATTTATCTGATGGCTGGAAATACACACCCCAGAAAATTCTATCAATAAAAGGAACTTACTTCTGCATACAAGCAGAGAATGAAGGGATGCCTGCAAAACTTGGGATAATATGCTCAGATCCTAACTCTAGATGGGAAATGATCTCAGATTCGAAGTTGCATCTCTCATCTAAACTCAGCGATGATTCTAATGTATGCTTAGATGTAGACGATAACAACAACATTGTGACCAATGCTTGCAAATGCTTGAGCAGAGATCGTACATGTGACCCTAGTAGCCAATGGTTCAAACTTATTGACAGCGGAAGGAGATCAATGTTGACAACCTCAACATCATCCATGCTAAATTCATCAGACCTTTATGGAAACCATTAA 1674 0.4116 MILLKKHEMVFNFVSALITTILLSGAIVEVKGLPLHTDSRWIVNEDGQRVKLACVNWVSHLEAVVAEGLSKKPVDVISNGIKSMGFNCVRLTWPIVLVTNDSLASLTVRSSFQNLALLESIAGVQTNNPSIIDLPLIQAFQAVVKSLGDNDVMVILDNHITQPGWCCSNSDGNGFFGDKFFDPNQWILGLTKMASLFNGVTNVVGMSLRNELRGPKQNVNDWYKYMVKGAEAIHAANPDVLVILSGLNFDKDLSFIQNRPVSLTFKGKLVYEAHWYAFTDGQAWVNGNPNQVCGQVAGNMMRTSGFLVNQGWPLFISEFGGDLRGTNVNDNRYLNCFLAVAAELDLDWALWTLVGSYYFRQGVIGMEEFYGILSWDWTQVRNTTFLNRISALQLPFRGPGITRGNPYKLIFHPLTGLCVIRKSLLDPLTLGPCYLSDGWKYTPQKILSIKGTYFCIQAENEGMPAKLGIICSDPNSRWEMISDSKLHLSSKLSDDSNVCLDVDDNNNIVTNACKCLSRDRTCDPSSQWFKLIDSGRRSMLTTSTSSMLNSSDLYGNH 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01719 557 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 5 546 - -
Gma05g01719 557 Pfam Cellulase (glycosyl hydrolase family 5) 75 353 IPR001547 GO:0004553|GO:0071704
Gma05g01719 557 Gene3D Glycosidases 33 393 - -
Gma05g01719 557 SUPERFAMILY Ricin B-like lectins 403 531 IPR035992 -
Gma05g01719 557 SUPERFAMILY (Trans)glycosidases 34 385 IPR017853 -
Gma05g01719 557 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 5 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01719 Gma-Chr5 38859385 38863425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01719 34 548 Glycoside Hydrolase AT1G13130 60.536 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01719 - - gmx:100790415 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01719 05 38859385 38863425 Gma08g01205 08 10255439 10262018 GST