Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00436 ATGGCGCTGTTCCTTCTCTACGAATCCGCTTCGGGCTACAGCCTGTTCGAGGTTCACGGCGTCGATGAAATCGGCCAGAACACCGAAGCGGTTCGGAACTCCGTTTCGGACCTCAACAGGTTCGGCAAAGTCGTTAAGCTTCGCTCCTTCAACCCTTTCACTTCCGCTCTCGATGCTCTCAAACAGTGCAACGCCGTCTCCGAAGGCATATTAACTGATGAGCTGAGGACTGTCTTGGAGACCAACTTGCCTAAAGTGAAGGAAGGTAAGAAGTCCAAGTTCAGTTTAGGTGTGTCCGATCCTAAGATTGGTTCCCAGATATCTGAAGTGACTAAGATTCCTTGCCAAAGTAATGAGTTTGTGAGTGAACTTCTTCGTGGTGTGCGATTCCATTTTGATACGTTTGTTGGTGATCTCAAGTCTGGAGATTTGGAAAAGGCACAACTTGGTCTGGGACATAGTTACAGCAGGGCAAAGGTGAAGTTTAATGTTAACCGTGTAGACAACATGGTTATTCAAGCTATCTTCCTTCTTGATACACTTGACAAGGATATTAATTCATTCTCCATGAGAGTCAGAGAGTGGTATTCTTGGCATTTTCCTGAGCTGGTGAAAATTGTAAATGATAATTATCTGTATGCCAAAGTTGCAAAATTTATTGAGGATAAGGCAAAGTTGGCTGAAGACACGATTCCAGGCTTAACTGACATAGTTGGAGATGAAGATAAAGCAAAGGAGATTGTGGAAGCTGCCAAAGCCTCCATGGGACAGGATTTGTCCCCAGTGGACTTAATCAATGTCCATCAATTTGCACAGAGGGTAATGGACCTATCTGAGTACAGAAAGAACTTATATGATTACCTGGTTGCTAAAATGAATGATATTGCACCAAATTTGGCCACTTTAATTGGTGAAGTTGTTGGTGCTCGTTTGATTTCCCATGCTGGTAGCCTCACAAATTTGGCAAAGTGCCCCTCTTCAACTCTTCAAATTCTTGGTGCGGAGAAGGCTTTGTTCAGGGCATTAAAAACAAGAGGAAACACTCCCAAATATGGTTTGATATTCCACTCTTCTTTTATTGGTCGGGCATCTGCCAAAAATAAGGGCAGAATGGCTCGATATCTTGCAAACAAATGCTCAATTGCATCACGGATTGACTGCTTTGCTGAAAGGGGTACTACTGTTTTTGGGGAGAAACTGCGTGAGCAAGTTGAGGAACGACTTGACTTTTATGACAAGGGAGTTGCCCCTCGCAAGAACATAGATGTCATGCAGGCTGCTATTGAAAGTGCTGAAAACAAAGATACAGAGATGGAAACAGAAGCACCTGCCGAAGTTTCAGGCAAGAAAACCAAAAAGAAGAAACAAAAAGCTGCTGCTGCTGAAGGTGATGACATGGCTGTAGATACAAATGGTGATGCTGTGGAGGATCATAAATCAGAGAAGAAGAAAAAGAAAGAAAAGAGGAAATTGGAACAGGAGATGGAGGTCGACGATCAGGCTGAAGATGATGGTGCTAATGGGGTCACAAGTGAACAAGAAGGAACAGTGAAAAAGAAGAAGAATAAAAAGGATAGTAACGGAGAAGCTTTGGAGGCTGGTGGAGAGTCTAAGAAGAAGAAAAAGAAATCAAAAAAGAAGGATACGGAGTAA 1653 0.4319 MALFLLYESASGYSLFEVHGVDEIGQNTEAVRNSVSDLNRFGKVVKLRSFNPFTSALDALKQCNAVSEGILTDELRTVLETNLPKVKEGKKSKFSLGVSDPKIGSQISEVTKIPCQSNEFVSELLRGVRFHFDTFVGDLKSGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFIEDKAKLAEDTIPGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVHQFAQRVMDLSEYRKNLYDYLVAKMNDIAPNLATLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFAERGTTVFGEKLREQVEERLDFYDKGVAPRKNIDVMQAAIESAENKDTEMETEAPAEVSGKKTKKKKQKAAAAEGDDMAVDTNGDAVEDHKSEKKKKKEKRKLEQEMEVDDQAEDDGANGVTSEQEGTVKKKKNKKDSNGEALEAGGESKKKKKKSKKKDTE 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00436 550 MobiDBLite consensus disorder prediction 432 449 - -
Gma05g00436 550 PANTHER BNACNNG34340D PROTEIN 1 547 - -
Gma05g00436 550 Gene3D Nop domain 299 423 IPR042239 -
Gma05g00436 550 Coils Coil 475 504 - -
Gma05g00436 550 MobiDBLite consensus disorder prediction 430 550 - -
Gma05g00436 550 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Gma05g00436 550 MobiDBLite consensus disorder prediction 514 538 - -
Gma05g00436 550 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 547 IPR045056 GO:0030515|GO:0031428|GO:0032040
Gma05g00436 550 SMART NOSIC_2 170 222 IPR012976 -
Gma05g00436 550 Coils Coil 421 441 - -
Gma05g00436 550 Gene3D - 140 298 - -
Gma05g00436 550 MobiDBLite consensus disorder prediction 471 496 - -
Gma05g00436 550 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Gma05g00436 550 SUPERFAMILY Nop domain 163 412 IPR036070 -
Gma05g00436 550 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00436 Gma-Chr5 4154670 4158035 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00436 K14564 - gmx:100794470 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00436 05 4154670 4158035 Gma05g00436 05 4154670 4158035 ECH
Gma17g01192 17 10464388 10467801 Gma05g00436 05 4154670 4158035 GST