Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00434 ATGGACCTCGGAACCTATGAAGTGCCAGAAGGAGTGGACATTCTAGGAAGATACGATGCAGAGTTTGCAAAAATCCTCACAAAAGACGCTTTGAAATTCGTTGCTGAGCTGCAACGTGAGTTCAGGAGCGATATCAAGCATGCATTAGAGAGCAGAAGAGAGGCAAAGAAGAAGTACAATGAAGGGACTCTTCCGGGGTTTGATCCTGCCACCAGTCACATTAGAGACCAGGAGTGGCTGTGTGCACCTGTTCCACCAGCTGCTGCTGATAGGAAAGTGGAGATCACTGGCCCTGTGGACAGAAAAATGGTCATCAATGCTCTCAACTCTGCAGCTAAAGTCTTTATGGCTGATTTAGAAGATGCACTGTCACCGACCTGGGAAAATCTTATTAGTGGTCAAGTGAACTTGAAGGATGCTGTGGATGGGACAATAAGCTTCCATGACAAAGTAAGAAACAGGGTTTACAAGCTCAATGATCAGACAGCAAAGCTTTTTGTGAGACCAAGAGGTTGGCATCTACCTGAAGCACATATTCTGATTGATGGTGAACCTGCAACTGGTTGCCTTGTTGATTTTGGCCTCTATTTCTACCACAACCACTCGGCATTCCGACGCACTCAAGGTGCTGGCTTTGGCCCTTTCTTTTATCTTCCCAAAATGGAGCATTCAAGGGAAGCTAAGATATGGAACAGTGTGTTTGAGAAGGCTGAGGATGTAGCAGGCATTGAAAGAGGAAGCATAAGGGCAACGGTTCTGATAGAAACACTTCCTGCAGTGTTTCAAATGGATGAAATTCTATATGAGCTGAAAGAGCATTCGGTGGGTCTAAACTGTGGGCGTTGGGATTACATTTTCAGTTATGTTAAAACCTTCCAGACTCACCCAGATCGTCTACTACCAGACAGGGTCCAGGTTGGCATGACTCAACATTTCATGAAGAGTTACTCTGATCTCCTCATCAGGACATGCCACAGGCGCGGTGTGCATGCTATGGGAGGAATGGCAGCACAGATTCCAATCAAAGATGACCCAGTTGCAAATGAGGCAGCACTGGAACTTGTAAGGAAGGACAAGCTTAGAGAAGTGAAGGCAGGCCACGATGGAACTTGGGCTGCACATCCTGGTCTCATTCCATCCTGCATGGAGGTTTTCAACAACAACATGGGCAATGCTCCCAACCAGATAGACACAGTGAAACGCGATGATGCTGCAAACTTAACTGAACAAGACCTCTTGCAGATACCAACAGGAACCCGGACCATGGAAGGTCTCAGATTGAATACAAGGGTGGGCATTCAGTACTTGGCAGCATGGCTCAGCGGAAGCGGTTGCGTGCCTCTTTACAACCTCATGGAAGATGCTGCCACTGCTGAGATTAGCAGGGTGCAGAACTGGCAGTGGCTCAAGTATGGAGTGGAGCTAGATGGGGATGGGCTTGGAGAGAAAGTGAACAAAGACCTTTTTCATAGAGTGGTTGAAGAAGAGATGGCTAGGATTGAAAAGGAAGTGGGAACAGAGAAGTTCGAGAAGGGAATGTACAAGGAGGCTTGCAAGATCTTCACTCGCCAATGCACGTCCCTAACACTTGATGATTTTCTCACTTTGGATGCCTATAATTACATAGTCGTGCATCACCCCAAGGAAGGAACCGTCAAAGCTTCGAACTAA 1671 0.4698 MDLGTYEVPEGVDILGRYDAEFAKILTKDALKFVAELQREFRSDIKHALESRREAKKKYNEGTLPGFDPATSHIRDQEWLCAPVPPAAADRKVEITGPVDRKMVINALNSAAKVFMADLEDALSPTWENLISGQVNLKDAVDGTISFHDKVRNRVYKLNDQTAKLFVRPRGWHLPEAHILIDGEPATGCLVDFGLYFYHNHSAFRRTQGAGFGPFFYLPKMEHSREAKIWNSVFEKAEDVAGIERGSIRATVLIETLPAVFQMDEILYELKEHSVGLNCGRWDYIFSYVKTFQTHPDRLLPDRVQVGMTQHFMKSYSDLLIRTCHRRGVHAMGGMAAQIPIKDDPVANEAALELVRKDKLREVKAGHDGTWAAHPGLIPSCMEVFNNNMGNAPNQIDTVKRDDAANLTEQDLLQIPTGTRTMEGLRLNTRVGIQYLAAWLSGSGCVPLYNLMEDAATAEISRVQNWQWLKYGVELDGDGLGEKVNKDLFHRVVEEEMARIEKEVGTEKFEKGMYKEACKIFTRQCTSLTLDDFLTLDAYNYIVVHHPKEGTVKASN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00434 556 Gene3D Malate synthase, domain III 419 543 IPR044856 -
Gma05g00434 556 Pfam Malate synthase 13 543 IPR001465 GO:0004474|GO:0006097
Gma05g00434 556 PANTHER MALATE SYNTHASE 5 548 IPR006252 GO:0004474|GO:0006097
Gma05g00434 556 Gene3D Malate synthase, domain 3 8 418 IPR046363 -
Gma05g00434 556 CDD malate_synt_A 25 543 IPR006252 GO:0004474|GO:0006097
Gma05g00434 556 ProSitePatterns Malate synthase signature. 271 286 IPR019830 GO:0004474|GO:0006097
Gma05g00434 556 TIGRFAM malate_syn_A: malate synthase A 25 542 IPR006252 GO:0004474|GO:0006097
Gma05g00434 556 PIRSF Malate_synth 4 544 IPR006252 GO:0004474|GO:0006097
Gma05g00434 556 SUPERFAMILY Malate synthase G 5 544 IPR011076 GO:0003824
Gma05g00434 556 PANTHER MALATE SYNTHASE 5 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00434 Gma-Chr5 4121105 4124596 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00434 K01638 - gmx:100782820 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00434 05 4121105 4124596 Gma05g00434 05 4121105 4124596 ECH
Gma17g01190 17 10441695 10445463 Gma05g00434 05 4121105 4124596 GST