Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00423 ATGGAAGAAGAGGGTTCTCAGCAGCCACAGTTGGTGCTTGCCGAGAAGCTATTCCTTCTCCGACAACCCGTTCAAGACATTGACAAGGTTCGCTACAAGGAGGATGTTTTCACTCACATCAAGGAAAACGAGATGGTCCCTTTGTACGAGACCCTAGTCGCCGATTCCGTGTTGGACTTGGATCGTGCCCTTTTGGACTTCATGCGCGCTAAAATTGAAGACGAGCTCACCAAGCTCGACGAAAAGATTGCTGATGCTGAGGAAAACTTAGGAGAGAGTGAAGTTCGTGAGGCTCACTTGGCAAAATCCTTGTTTTTTATCCGGATTATGGACAAGGAGAAAGCCTTGGAACATCTCAAGATAACAGAAACCAAGACAGTTGCAGTTGGCCAGAAAATGGACTTGGTGTTTTATACATTGCAGCTTGGTTTCTTCGACATGGATTTTGATCTCGTTTCCAAAAGCATTGACAAAGCCAAAAACTTGTTTGAAGAAGGTGGTGATTGGGAAAGGAAGAATAGGCTGAAAGTGTACGAAGGCCTGTACTGCATGTCCACTCGAAATTTCAAGAAGGCTGCCAAGTTGTTTTTGGATTCTATTTCAACCTTTACCACCTGTGAACTTTTTCCCTATGACACCTTTATATTTTATACAGTTTTGACCAGCATTATATCATTGGATAGAGTTTCCCTAAAGCAAAAGGTAGTGGATGCTCCAGAGATCTTGACAGTGATTGGCAAAATCCCATATCTTTCAGAGTTTTTGAACTCCTTATATGATTGTCAATACAAGTCTTTTTTCTCAGCATTTGCTGGCCTGACAGAGCAAATTAAGTTGGACCGCTATCTGCATCCACACTTCCGATATTACATGAGGGAGGTCAGAACCGTTGTTTATTCCCAATTTTTGGAATCTTACAAGAGTGTGACAATTGAAGCCATGGCAAAAGCCTTTGGAGTGACAGAGGATTTCATTGATGTGGAGCTATCACGCTTTATTGCAGCAGGGAAGCTTCATTGTAAGATTGATAAAGTTGAAGGTGTTCTTGAAACTAATCGCCCTGATGCTAAGAATGCTCTTTACCAAGCAACTATTAAGCAAGGGGACTTCCTATTGAATCGGATCCAGAAATTGTCACGTGTGATAGATCTTTAG 1155 0.4225 MEEEGSQQPQLVLAEKLFLLRQPVQDIDKVRYKEDVFTHIKENEMVPLYETLVADSVLDLDRALLDFMRAKIEDELTKLDEKIADAEENLGESEVREAHLAKSLFFIRIMDKEKALEHLKITETKTVAVGQKMDLVFYTLQLGFFDMDFDLVSKSIDKAKNLFEEGGDWERKNRLKVYEGLYCMSTRNFKKAAKLFLDSISTFTTCELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTEDFIDVELSRFIAAGKLHCKIDKVEGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00423 384 PANTHER BNAC08G11800D PROTEIN 4 384 - -
Gma05g00423 384 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 285 368 - -
Gma05g00423 384 SUPERFAMILY "Winged helix" DNA-binding domain 280 361 IPR036390 -
Gma05g00423 384 PANTHER 26S PROTESOME SUBUNIT 6 4 384 IPR019585 -
Gma05g00423 384 Pfam 26S proteasome subunit RPN7 61 234 IPR045135 -
Gma05g00423 384 SMART PINT_4 285 368 IPR000717 -
Gma05g00423 384 Pfam PCI domain 252 352 IPR000717 -
Gma05g00423 384 Gene3D - 19 335 - -
Gma05g00423 384 Coils Coil 69 96 - -
Gma05g00423 384 ProSiteProfiles PCI domain profile. 188 356 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00423 Gma-Chr5 4017726 4022378 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00423 K03037 - gmx:100802610 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00423 05 4017726 4022378 Gma05g00423 05 4017726 4022378 ECH
Gma17g01181 17 10353354 10356601 Gma05g00423 05 4017726 4022378 GST